Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm26135-201ENSMUST00000101993 72 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm22722-201ENSMUST00000157467 132 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm26088-201ENSMUST00000157896 131 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm26482-201ENSMUST00000158015 62 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm22833-201ENSMUST00000158292 132 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm26022-201ENSMUST00000158663 108 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm24878-201ENSMUST00000158782 104 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm22527-201ENSMUST00000158816 106 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm4468-201ENSMUST00000170206 294 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Snord50b-201ENSMUST00000178497 72 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm27645-201ENSMUST00000183348 77 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm37081-201ENSMUST00000192034 196 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm42834-201ENSMUST00000196845 256 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Gm42739-201ENSMUST00000200687 226 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.76□□□□□ -1.81
Limch1Q3UH68 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Limch1Q3UH68 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Limch1Q3UH68 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
Limch1Q3UH68 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Limch1Q3UH68 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm25407-201ENSMUST00000104102 134 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm15282-201ENSMUST00000117707 300 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm13801-201ENSMUST00000120750 160 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm22075-201ENSMUST00000158599 192 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm29603-201ENSMUST00000186792 334 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Limch1Q3UH68 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
Limch1Q3UH68 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.75□□□□□ -1.81
Limch1Q3UH68 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm22148-201ENSMUST00000104445 107 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm25539-201ENSMUST00000116886 122 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Mir1198-201ENSMUST00000116995 121 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm12143-201ENSMUST00000119666 332 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.74□□□□□ -1.81
Limch1Q3UH68 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm24388-201ENSMUST00000177872 107 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Limch1Q3UH68 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Limch1Q3UH68 Mir21b-201ENSMUST00000184317 108 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm44393-201ENSMUST00000197418 138 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm18502-201ENSMUST00000218679 199 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm24625-201ENSMUST00000082622 130 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.74□□□□□ -1.81
Limch1Q3UH68 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Limch1Q3UH68 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Limch1Q3UH68 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm13761-201ENSMUST00000117238 807 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm9119-201ENSMUST00000118866 495 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm13922-201ENSMUST00000119505 156 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm15861-201ENSMUST00000120979 339 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm23044-201ENSMUST00000157891 100 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm26403-201ENSMUST00000158500 105 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Mir7081-201ENSMUST00000184490 75 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Gm23723-201ENSMUST00000082996 132 ntBASIC3.73□□□□□ -1.81
Limch1Q3UH68 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Limch1Q3UH68 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Limch1Q3UH68 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Limch1Q3UH68 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Limch1Q3UH68 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Limch1Q3UH68 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.72□□□□□ -1.81
Limch1Q3UH68 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Limch1Q3UH68 Gm24096-201ENSMUST00000103905 110 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 Gm15190-201ENSMUST00000120855 276 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 Gm44338-201ENSMUST00000198614 110 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 Gm43993-201ENSMUST00000203972 247 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.72□□□□□ -1.81
Limch1Q3UH68 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Limch1Q3UH68 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Limch1Q3UH68 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm24119-201ENSMUST00000103979 246 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm25728-201ENSMUST00000104525 159 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm22553-201ENSMUST00000157797 295 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm22557-201ENSMUST00000157804 102 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm22349-201ENSMUST00000157864 107 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm22139-201ENSMUST00000158747 105 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm17161-201ENSMUST00000169187 524 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm27921-201ENSMUST00000183968 108 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm34139-201ENSMUST00000196166 294 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Gm5010-201ENSMUST00000213131 260 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.71□□□□□ -1.82
Limch1Q3UH68 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Limch1Q3UH68 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms