Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sox9Q04887 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sox9Q04887 Gm23578-201ENSMUST00000103943 104 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm23653-201ENSMUST00000116751 97 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm11414-201ENSMUST00000121795 263 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm23466-201ENSMUST00000157133 106 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm26099-201ENSMUST00000157248 109 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm23716-201ENSMUST00000157348 144 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm22883-201ENSMUST00000157376 106 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm17052-201ENSMUST00000165496 289 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.17□□□□□ -1.9
Sox9Q04887 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.17□□□□□ -1.9
Sox9Q04887 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sox9Q04887 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sox9Q04887 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sox9Q04887 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sox9Q04887 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sox9Q04887 Gm26026-201ENSMUST00000122726 123 ntBASIC3.16□□□□□ -1.9
Sox9Q04887 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.16□□□□□ -1.9
Sox9Q04887 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.16□□□□□ -1.9
Sox9Q04887 Gm26928-201ENSMUST00000182674 572 ntBASIC3.16□□□□□ -1.9
Sox9Q04887 Gm24164-201ENSMUST00000093663 104 ntBASIC3.16□□□□□ -1.9
Sox9Q04887 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sox9Q04887 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sox9Q04887 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.16□□□□□ -1.9
Sox9Q04887 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Sox9Q04887 Snord14c-201ENSMUST00000101927 86 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm23911-201ENSMUST00000104596 134 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.15□□□□□ -1.91
Sox9Q04887 Mir1967-201ENSMUST00000157789 82 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm22382-201ENSMUST00000158185 130 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm27465-201ENSMUST00000184290 91 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm38183-201ENSMUST00000193189 205 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm34314-201ENSMUST00000203622 367 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm45543-201ENSMUST00000209327 88 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.15□□□□□ -1.91
Sox9Q04887 Gm22299-201ENSMUST00000082663 136 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm23377-201ENSMUST00000082943 126 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.15□□□□□ -1.91
Sox9Q04887 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sox9Q04887 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox9Q04887 Gm23766-201ENSMUST00000103894 80 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Gm26247-201ENSMUST00000116702 91 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Gm12304-201ENSMUST00000120312 385 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.14□□□□□ -1.91
Sox9Q04887 Gm24922-201ENSMUST00000158511 102 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Gm16584-201ENSMUST00000159267 189 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Sox9Q04887 Gm27753-201ENSMUST00000184742 203 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Gm45013-201ENSMUST00000206883 178 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Sox9Q04887 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.14□□□□□ -1.91
Sox9Q04887 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Sox9Q04887 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sox9Q04887 Gm14652-201ENSMUST00000118479 235 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm16032-201ENSMUST00000118534 168 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm22217-201ENSMUST00000157556 313 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm22097-201ENSMUST00000157929 278 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm17166-201ENSMUST00000172006 431 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm25642-201ENSMUST00000175137 66 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm25528-201ENSMUST00000180264 132 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm29005-201ENSMUST00000186773 320 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm43193-201ENSMUST00000197732 441 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.13□□□□□ -1.91
Sox9Q04887 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sox9Q04887 Gm20144-201ENSMUST00000203031 165 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm23136-201ENSMUST00000083425 99 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Gm24163-201ENSMUST00000093660 132 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sox9Q04887 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.13□□□□□ -1.91
Sox9Q04887 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox9Q04887 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox9Q04887 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox9Q04887 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sox9Q04887 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Sox9Q04887 Mir693-201ENSMUST00000102187 89 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sox9Q04887 Mir878-201ENSMUST00000104680 78 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Gm26249-201ENSMUST00000116708 118 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Gm11253-201ENSMUST00000118486 201 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Gm22651-201ENSMUST00000157872 94 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Gm17528-201ENSMUST00000171026 239 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Mir6399-201ENSMUST00000184050 84 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.12□□□□□ -1.91
Sox9Q04887 Gm19790-201ENSMUST00000214414 251 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Snord82-201ENSMUST00000082889 70 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.12□□□□□ -1.91
Sox9Q04887 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 186.8 ms