Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm22829-201ENSMUST00000083771 106 ntBASIC-0.3□□□□□ -2.46
PrkdcP97313 Gm13454-201ENSMUST00000118166 483 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm14629-201ENSMUST00000122428 144 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm23106-201ENSMUST00000157554 101 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm25332-201ENSMUST00000158038 105 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm43402-201ENSMUST00000197159 159 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 CT485612.4-201ENSMUST00000223405 250 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm12370-201ENSMUST00000117809 604 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 AC122901.2-201ENSMUST00000216926 285 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 AC112935.1-201ENSMUST00000227603 250 ntBASIC-0.31□□□□□ -2.46
PrkdcP97313 Gm24142-201ENSMUST00000101960 107 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm14129-201ENSMUST00000122436 291 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm45965-201ENSMUST00000221192 1284 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 AC126691.1-201ENSMUST00000226534 202 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Snora75-201ENSMUST00000082903 133 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm43345-201ENSMUST00000199484 269 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm23932-201ENSMUST00000082914 107 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm22731-201ENSMUST00000158086 94 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm28000-201ENSMUST00000184380 85 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm26166-201ENSMUST00000083788 107 ntBASIC-0.32□□□□□ -2.46
PrkdcP97313 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
PrkdcP97313 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Mir7667-201ENSMUST00000183866 63 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC-0.33□□□□□ -2.46
PrkdcP97313 AC173482.5-201ENSMUST00000224181 327 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm22997-201ENSMUST00000082845 107 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm8858-201ENSMUST00000118259 342 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm14530-201ENSMUST00000122391 333 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Gm24573-201ENSMUST00000175499 112 ntBASIC-0.33□□□□□ -2.46
PrkdcP97313 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
PrkdcP97313 Mir3964-201ENSMUST00000174898 74 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 AC163033.1-201ENSMUST00000218608 157 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Ear-ps8-201ENSMUST00000161935 354 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-0.34□□□□□ -2.46
PrkdcP97313 AC132446.1-201ENSMUST00000222655 226 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
PrkdcP97313 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Gm14716-201ENSMUST00000120138 718 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.34□□□□□ -2.46
PrkdcP97313 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC-0.34□□□□□ -2.46
PrkdcP97313 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.35□□□□□ -2.46
PrkdcP97313 n-R5s216-201ENSMUST00000122755 112 ntBASIC-0.35□□□□□ -2.46
PrkdcP97313 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.35□□□□□ -2.46
PrkdcP97313 Gm45689-201ENSMUST00000210522 133 ntBASIC-0.35□□□□□ -2.46
PrkdcP97313 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm43004-201ENSMUST00000201872 703 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm24056-201ENSMUST00000158617 146 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Gm23370-201ENSMUST00000199545 130 ntBASIC-0.35□□□□□ -2.47
PrkdcP97313 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm23523-201ENSMUST00000180190 107 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm19891-201ENSMUST00000189771 303 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm43171-201ENSMUST00000199882 291 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm13396-201ENSMUST00000120617 271 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm9156-201ENSMUST00000189660 463 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm37089-201ENSMUST00000195616 129 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
PrkdcP97313 Mir18-201ENSMUST00000083469 96 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm15167-201ENSMUST00000121997 187 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm23463-201ENSMUST00000122468 99 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm24480-201ENSMUST00000157442 103 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Mir183-201ENSMUST00000083685 70 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Mir374b-201ENSMUST00000102314 95 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.36□□□□□ -2.47
PrkdcP97313 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC-0.36□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 164.3 ms