Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.64□□□□□ -1.99
Hmgb1P63158 Gm29604-201ENSMUST00000187176 163 ntBASIC2.64□□□□□ -1.99
Hmgb1P63158 Gm28912-201ENSMUST00000189001 234 ntBASIC2.64□□□□□ -1.99
Hmgb1P63158 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Hmgb1P63158 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.64□□□□□ -1.99
Hmgb1P63158 Gm45452-201ENSMUST00000210905 177 ntBASIC2.64□□□□□ -1.99
Hmgb1P63158 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.64□□□□□ -1.99
Hmgb1P63158 Gm26329-201ENSMUST00000093723 110 ntBASIC2.64□□□□□ -1.99
Hmgb1P63158 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Hmgb1P63158 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Hmgb1P63158 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm25914-201ENSMUST00000157618 153 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Mir1927-201ENSMUST00000158579 109 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm25491-201ENSMUST00000158733 308 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm17052-201ENSMUST00000165496 289 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Mir3057-201ENSMUST00000175040 91 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Mir6419-201ENSMUST00000184784 113 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm37918-201ENSMUST00000192071 120 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm32175-201ENSMUST00000193641 346 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm46997-201ENSMUST00000222108 217 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm24625-201ENSMUST00000082622 130 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm25789-201ENSMUST00000083294 76 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Mir30d-201ENSMUST00000083503 82 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.63□□□□□ -1.99
Hmgb1P63158 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm22032-201ENSMUST00000116946 116 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm11420-201ENSMUST00000120047 402 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm8121-201ENSMUST00000153583 499 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm26150-201ENSMUST00000157426 151 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm27760-201ENSMUST00000185048 114 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm28408-201ENSMUST00000191557 463 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm42834-201ENSMUST00000196845 256 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Gm45907-201ENSMUST00000213023 193 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.62□□□□□ -1.99
Hmgb1P63158 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.62□□□□□ -1.99
Hmgb1P63158 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.62□□□□□ -1.99
Hmgb1P63158 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm13756-201ENSMUST00000117618 222 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm14307-201ENSMUST00000118930 291 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm15861-201ENSMUST00000120979 339 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm14297-201ENSMUST00000129110 291 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm16362-201ENSMUST00000135189 214 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm16358-201ENSMUST00000146046 210 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm43722-201ENSMUST00000196054 124 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 Gm43250-201ENSMUST00000196536 273 ntBASIC2.61□□□□□ -1.99
Hmgb1P63158 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.61□□□□□ -1.99
Hmgb1P63158 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Gm14652-201ENSMUST00000118479 235 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Gm6025-201ENSMUST00000121517 201 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Gm27793-201ENSMUST00000183405 76 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Gm28288-201ENSMUST00000191019 214 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Gm44384-201ENSMUST00000200208 114 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Snora3-201ENSMUST00000083082 132 ntBASIC2.6□□□□□ -1.99
Hmgb1P63158 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm26247-201ENSMUST00000116702 91 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm16021-201ENSMUST00000121176 219 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm23642-201ENSMUST00000157858 258 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm22538-201ENSMUST00000158169 299 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm22947-201ENSMUST00000158559 91 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm16561-201ENSMUST00000163001 192 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm37713-201ENSMUST00000191746 198 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Mir3069-201ENSMUST00000198802 65 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm25930-201ENSMUST00000082785 107 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm24355-201ENSMUST00000082858 122 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm24536-201ENSMUST00000083144 107 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm24163-201ENSMUST00000093660 132 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.59□□□□□ -1.99
Hmgb1P63158 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb1P63158 Gm22027-201ENSMUST00000122737 127 ntBASIC2.58□□□□□ -2
Hmgb1P63158 Gm23181-201ENSMUST00000158685 110 ntBASIC2.58□□□□□ -2
Hmgb1P63158 Mir7683-201ENSMUST00000183842 61 ntBASIC2.58□□□□□ -2
Hmgb1P63158 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.58□□□□□ -2
Hmgb1P63158 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.58□□□□□ -2
Hmgb1P63158 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.58□□□□□ -2
Hmgb1P63158 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.58□□□□□ -2
Hmgb1P63158 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb1P63158 Gm23851-201ENSMUST00000083831 103 ntBASIC2.58□□□□□ -2
Hmgb1P63158 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb1P63158 Gm23390-201ENSMUST00000157393 106 ntBASIC2.57□□□□□ -2
Hmgb1P63158 Gm23779-201ENSMUST00000157938 64 ntBASIC2.57□□□□□ -2
Hmgb1P63158 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.57□□□□□ -2
Hmgb1P63158 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.57□□□□□ -2
Hmgb1P63158 Gm44491-201ENSMUST00000196794 96 ntBASIC2.57□□□□□ -2
Hmgb1P63158 Gm44161-201ENSMUST00000203532 253 ntBASIC2.57□□□□□ -2
Hmgb1P63158 Gm45207-201ENSMUST00000207469 145 ntBASIC2.57□□□□□ -2
Hmgb1P63158 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.57□□□□□ -2
Hmgb1P63158 Gm13581-201ENSMUST00000120675 278 ntBASIC2.56□□□□□ -2
Hmgb1P63158 Gm11834-201ENSMUST00000122257 585 ntBASIC2.56□□□□□ -2
Hmgb1P63158 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms