Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col18a1P39061 Gm22148-201ENSMUST00000104445 107 ntBASIC3.69□□□□□ -1.82
Col18a1P39061 Gm14977-201ENSMUST00000121626 812 ntBASIC3.69□□□□□ -1.82
Col18a1P39061 Gm22477-201ENSMUST00000122569 316 ntBASIC3.69□□□□□ -1.82
Col18a1P39061 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.69□□□□□ -1.82
Col18a1P39061 Gm25698-201ENSMUST00000082897 107 ntBASIC3.69□□□□□ -1.82
Col18a1P39061 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col18a1P39061 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col18a1P39061 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Col18a1P39061 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.69□□□□□ -1.82
Col18a1P39061 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Col18a1P39061 Gm25753-201ENSMUST00000116792 121 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm14922-201ENSMUST00000121131 163 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm27399-201ENSMUST00000184250 78 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.68□□□□□ -1.82
Col18a1P39061 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col18a1P39061 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col18a1P39061 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col18a1P39061 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col18a1P39061 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm14069-201ENSMUST00000120815 229 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm23337-201ENSMUST00000158959 118 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm19427-201ENSMUST00000183619 208 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm22681-201ENSMUST00000083853 106 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.68□□□□□ -1.82
Col18a1P39061 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Col18a1P39061 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Col18a1P39061 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col18a1P39061 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col18a1P39061 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col18a1P39061 Gm24172-201ENSMUST00000104127 117 ntBASIC3.67□□□□□ -1.82
Col18a1P39061 AA413626-201ENSMUST00000121125 494 ntBASIC3.67□□□□□ -1.82
Col18a1P39061 Gm25980-201ENSMUST00000157176 218 ntBASIC3.67□□□□□ -1.82
Col18a1P39061 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.67□□□□□ -1.82
Col18a1P39061 Gm18982-201ENSMUST00000198118 529 ntBASIC3.67□□□□□ -1.82
Col18a1P39061 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col18a1P39061 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col18a1P39061 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col18a1P39061 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col18a1P39061 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Col18a1P39061 Gm24276-201ENSMUST00000102181 110 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm23950-201ENSMUST00000104026 129 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm22490-201ENSMUST00000157188 119 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm24084-201ENSMUST00000175173 137 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm37545-201ENSMUST00000186512 148 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col18a1P39061 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col18a1P39061 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col18a1P39061 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col18a1P39061 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col18a1P39061 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm12191-201ENSMUST00000118307 348 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm15067-201ENSMUST00000119534 156 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm9703-201ENSMUST00000119573 343 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm13801-201ENSMUST00000120750 160 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm15536-201ENSMUST00000121411 114 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm25961-201ENSMUST00000157174 135 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm22769-201ENSMUST00000158367 98 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm25646-201ENSMUST00000178527 79 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Mir8116-201ENSMUST00000184134 97 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Gm23677-201ENSMUST00000083156 104 ntBASIC3.66□□□□□ -1.82
Col18a1P39061 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
Col18a1P39061 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col18a1P39061 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col18a1P39061 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Col18a1P39061 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.65□□□□□ -1.82
Col18a1P39061 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.65□□□□□ -1.82
Col18a1P39061 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.65□□□□□ -1.82
Col18a1P39061 Gm36954-201ENSMUST00000195362 363 ntBASIC3.65□□□□□ -1.83
Col18a1P39061 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.65□□□□□ -1.83
Col18a1P39061 Gm26449-201ENSMUST00000082452 104 ntBASIC3.65□□□□□ -1.83
Col18a1P39061 Gm26458-201ENSMUST00000082832 128 ntBASIC3.65□□□□□ -1.83
Col18a1P39061 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col18a1P39061 Gm14073-201ENSMUST00000117344 381 ntBASIC3.64□□□□□ -1.83
Col18a1P39061 Gm25054-201ENSMUST00000157370 97 ntBASIC3.64□□□□□ -1.83
Col18a1P39061 Gm29610-201ENSMUST00000187749 453 ntBASIC3.64□□□□□ -1.83
Col18a1P39061 Gm37417-201ENSMUST00000195257 454 ntBASIC3.64□□□□□ -1.83
Col18a1P39061 Gm25130-201ENSMUST00000082650 156 ntBASIC3.64□□□□□ -1.83
Col18a1P39061 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.64□□□□□ -1.83
Col18a1P39061 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Col18a1P39061 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Col18a1P39061 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col18a1P39061 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col18a1P39061 Gm24670-201ENSMUST00000104154 132 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Mdga2-203ENSMUST00000113942 423 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm22264-201ENSMUST00000178200 107 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm43512-201ENSMUST00000198495 176 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm43381-201ENSMUST00000198553 165 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms