Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm42805-201ENSMUST00000196158 276 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm42533-201ENSMUST00000196247 157 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm42164-201ENSMUST00000198881 379 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm44870-201ENSMUST00000207291 357 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm7495-201ENSMUST00000215099 426 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.64□□□□□ -2.31
H3f3aP84244 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.64□□□□□ -2.31
H3f3aP84244 Gm20102-201ENSMUST00000222445 220 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm24615-201ENSMUST00000083268 113 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
H3f3aP84244 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.64□□□□□ -2.31
H3f3aP84244 Gm14638-201ENSMUST00000121338 216 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Gm25544-201ENSMUST00000122676 120 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
H3f3aP84244 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Gm27421-201ENSMUST00000184729 167 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Gm42570-201ENSMUST00000195937 292 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Gm44491-201ENSMUST00000196794 96 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Gm40810-201ENSMUST00000219149 253 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.63□□□□□ -2.31
H3f3aP84244 Gm22477-201ENSMUST00000122569 316 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Gm20689-201ENSMUST00000176033 279 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Gm27656-201ENSMUST00000185055 80 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Gm42475-201ENSMUST00000201212 295 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Gm18242-201ENSMUST00000218455 542 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Mir465-201ENSMUST00000093563 74 ntBASIC0.62□□□□□ -2.31
H3f3aP84244 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
H3f3aP84244 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
H3f3aP84244 Gm22543-201ENSMUST00000104347 94 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm12806-201ENSMUST00000119384 268 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm25784-201ENSMUST00000122524 81 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm25011-201ENSMUST00000158398 126 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm10177-202ENSMUST00000161698 207 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm23419-201ENSMUST00000175523 84 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.61□□□□□ -2.31
H3f3aP84244 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm29661-201ENSMUST00000186781 315 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm29308-201ENSMUST00000188863 315 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm38231-201ENSMUST00000192030 347 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.61□□□□□ -2.31
H3f3aP84244 Gm18703-201ENSMUST00000215318 333 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.61□□□□□ -2.31
H3f3aP84244 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
H3f3aP84244 Gm20386-201ENSMUST00000174010 132 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 Gm27420-201ENSMUST00000183823 79 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 Gm37399-201ENSMUST00000195224 416 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 Gm43250-201ENSMUST00000196536 273 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 Gm10264-201ENSMUST00000220589 429 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
H3f3aP84244 Gm25851-201ENSMUST00000082794 107 ntBASIC0.6□□□□□ -2.31
H3f3aP84244 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
H3f3aP84244 Gm25976-201ENSMUST00000158695 130 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Gm23340-201ENSMUST00000158955 123 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Gm17100-201ENSMUST00000168963 272 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
H3f3aP84244 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Gm43602-201ENSMUST00000196772 300 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Gm5010-201ENSMUST00000213131 260 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Gm9795-201ENSMUST00000062156 693 ntBASIC0.59□□□□□ -2.31
H3f3aP84244 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
H3f3aP84244 Gm24340-201ENSMUST00000104208 97 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
H3f3aP84244 Gm16265-201ENSMUST00000134558 108 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm23106-201ENSMUST00000157554 101 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm25491-201ENSMUST00000158733 308 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm17164-201ENSMUST00000169013 506 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Mir3061-201ENSMUST00000175129 91 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
H3f3aP84244 Mir6540-201ENSMUST00000184886 108 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm28956-201ENSMUST00000189047 427 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.58□□□□□ -2.32
H3f3aP84244 Gm34073-201ENSMUST00000195736 212 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
H3f3aP84244 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm6369-201ENSMUST00000069626 412 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Mir410-201ENSMUST00000083563 81 ntBASIC0.58□□□□□ -2.32
H3f3aP84244 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
H3f3aP84244 Mir706-201ENSMUST00000102262 84 ntBASIC0.57□□□□□ -2.32
H3f3aP84244 Gm24747-201ENSMUST00000157835 87 ntBASIC0.57□□□□□ -2.32
H3f3aP84244 Gm23819-201ENSMUST00000158744 109 ntBASIC0.57□□□□□ -2.32
H3f3aP84244 Gm16038-201ENSMUST00000159317 193 ntBASIC0.57□□□□□ -2.32
H3f3aP84244 Mir5104-201ENSMUST00000175319 94 ntBASIC0.57□□□□□ -2.32
H3f3aP84244 Gm23568-201ENSMUST00000177960 92 ntBASIC0.57□□□□□ -2.32
H3f3aP84244 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.57□□□□□ -2.32
H3f3aP84244 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.57□□□□□ -2.32
H3f3aP84244 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.57□□□□□ -2.32
H3f3aP84244 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.57□□□□□ -2.32
H3f3aP84244 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.57□□□□□ -2.32
H3f3aP84244 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.57□□□□□ -2.32
H3f3aP84244 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 159.3 ms