Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm15443-201ENSMUST00000118947 820 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm15067-201ENSMUST00000119534 156 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm25059-201ENSMUST00000157367 117 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm24551-201ENSMUST00000158645 92 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm7592-201ENSMUST00000160674 627 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Mir6399-201ENSMUST00000184050 84 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm44337-201ENSMUST00000196553 114 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm23614-201ENSMUST00000082598 107 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Lrif1Q8CDD9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm23010-201ENSMUST00000104151 126 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Snord98-201ENSMUST00000116819 65 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm14301-201ENSMUST00000120181 324 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm23169-201ENSMUST00000157157 112 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Snord43-201ENSMUST00000199549 108 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Mir107-201ENSMUST00000083660 87 ntBASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lrif1Q8CDD9 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm15526-201ENSMUST00000112504 204 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm24598-201ENSMUST00000122510 74 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm26024-201ENSMUST00000158657 322 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm24085-201ENSMUST00000175172 116 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Mir7225-201ENSMUST00000184178 54 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm44482-201ENSMUST00000199232 103 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm44429-201ENSMUST00000203542 186 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm25589-201ENSMUST00000082502 166 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Mir151-201ENSMUST00000083678 68 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Snora33-201ENSMUST00000093556 129 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm25207-201ENSMUST00000093745 107 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.7□□□□□ -2.14
Lrif1Q8CDD9 Gm22656-201ENSMUST00000104199 171 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm22713-201ENSMUST00000116895 130 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm11786-201ENSMUST00000120799 155 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm24419-201ENSMUST00000157875 332 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm22316-201ENSMUST00000158012 216 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm25994-201ENSMUST00000175392 101 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm19932-201ENSMUST00000177033 313 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm37054-201ENSMUST00000193481 543 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm44465-201ENSMUST00000199536 114 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm45296-201ENSMUST00000209625 205 ntBASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Lrif1Q8CDD9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm13475-201ENSMUST00000119290 234 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm24896-201ENSMUST00000122741 135 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm23983-201ENSMUST00000157142 114 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 U6.1-201ENSMUST00000157443 101 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm37128-201ENSMUST00000192599 232 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm46312-201ENSMUST00000220961 420 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm3867-201ENSMUST00000086108 279 ntBASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Lrif1Q8CDD9 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.67□□□□□ -2.14
Lrif1Q8CDD9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.67□□□□□ -2.14
Lrif1Q8CDD9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.67□□□□□ -2.14
Lrif1Q8CDD9 Gm23120-201ENSMUST00000157654 287 ntBASIC1.67□□□□□ -2.14
Lrif1Q8CDD9 Gm22338-201ENSMUST00000157715 129 ntBASIC1.67□□□□□ -2.14
Lrif1Q8CDD9 Gm27511-201ENSMUST00000183502 127 ntBASIC1.67□□□□□ -2.14
Lrif1Q8CDD9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms