Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm15896-201ENSMUST00000118045 440 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Gm12550-201ENSMUST00000118478 329 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Gm23933-201ENSMUST00000178405 79 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Gm26180-201ENSMUST00000179942 107 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Gm44476-201ENSMUST00000196225 91 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Snord68-201ENSMUST00000082516 86 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.12□□□□□ -2.07
Smchd1Q6P5D8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm15010-201ENSMUST00000117153 407 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm14980-201ENSMUST00000121247 736 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm14972-201ENSMUST00000121780 364 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm24005-201ENSMUST00000158459 296 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm22263-201ENSMUST00000180060 104 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Mir6352-201ENSMUST00000184495 116 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm43510-201ENSMUST00000197922 353 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm44533-201ENSMUST00000207782 268 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm26329-201ENSMUST00000093723 110 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.11□□□□□ -2.07
Smchd1Q6P5D8 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Mir195b-201ENSMUST00000184814 97 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm7240-201ENSMUST00000220769 664 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm24126-201ENSMUST00000104111 106 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm11859-201ENSMUST00000118099 455 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm24487-201ENSMUST00000178017 63 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm44881-201ENSMUST00000205425 367 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm44938-201ENSMUST00000208614 427 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm22443-201ENSMUST00000082890 107 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm23851-201ENSMUST00000083831 103 ntBASIC2.1□□□□□ -2.07
Smchd1Q6P5D8 Gm24582-201ENSMUST00000103967 103 ntBASIC2.09□□□□□ -2.07
Smchd1Q6P5D8 Gm22382-201ENSMUST00000158185 130 ntBASIC2.09□□□□□ -2.07
Smchd1Q6P5D8 Mir6399-201ENSMUST00000184050 84 ntBASIC2.09□□□□□ -2.07
Smchd1Q6P5D8 Gm24044-201ENSMUST00000083107 156 ntBASIC2.09□□□□□ -2.07
Smchd1Q6P5D8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.09□□□□□ -2.07
Smchd1Q6P5D8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm22270-201ENSMUST00000104034 132 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm24275-201ENSMUST00000116780 146 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm26149-201ENSMUST00000157432 108 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm24726-201ENSMUST00000158232 121 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Mir1927-201ENSMUST00000158579 109 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm24656-201ENSMUST00000177548 132 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm29604-201ENSMUST00000187176 163 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm26102-201ENSMUST00000157251 284 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm22843-201ENSMUST00000157710 134 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm27510-201ENSMUST00000158214 64 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm23476-201ENSMUST00000158881 274 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm17161-201ENSMUST00000169187 524 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Mir5624-201ENSMUST00000176635 61 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Mir6370-201ENSMUST00000183510 120 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm23246-201ENSMUST00000083371 67 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm26164-201ENSMUST00000083793 104 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm26175-201ENSMUST00000083794 131 ntBASIC2.08□□□□□ -2.08
Smchd1Q6P5D8 Gm23060-201ENSMUST00000102345 109 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm22151-201ENSMUST00000116963 58 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm13378-201ENSMUST00000117483 336 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm14269-201ENSMUST00000120455 306 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm24878-201ENSMUST00000158782 104 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Mir7661-201ENSMUST00000197023 61 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm44063-201ENSMUST00000203307 376 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm23779-201ENSMUST00000157938 64 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm22435-201ENSMUST00000158552 128 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm23967-201ENSMUST00000175062 78 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm28257-201ENSMUST00000185244 463 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm28794-201ENSMUST00000185276 136 ntBASIC2.07□□□□□ -2.08
Smchd1Q6P5D8 Gm29512-201ENSMUST00000185544 315 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 152.2 ms