Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.85□□□□□ -1.95
Hmgb1P63158 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.85□□□□□ -1.95
Hmgb1P63158 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.85□□□□□ -1.95
Hmgb1P63158 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.85□□□□□ -1.95
Hmgb1P63158 Mir496a-201ENSMUST00000093627 79 ntBASIC2.85□□□□□ -1.95
Hmgb1P63158 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Hmgb1P63158 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Hmgb1P63158 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm23128-201ENSMUST00000104257 132 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Mir1b-201ENSMUST00000117012 122 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm23128-202ENSMUST00000196578 133 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm43431-201ENSMUST00000198577 340 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm43993-201ENSMUST00000203972 247 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.84□□□□□ -1.95
Hmgb1P63158 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm22685-201ENSMUST00000082848 106 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Gm24977-201ENSMUST00000083106 163 ntBASIC2.84□□□□□ -1.95
Hmgb1P63158 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Hmgb1P63158 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
Hmgb1P63158 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm22674-201ENSMUST00000104413 131 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm12417-201ENSMUST00000119153 403 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm11254-201ENSMUST00000122368 653 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm22263-201ENSMUST00000180060 104 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm27979-201ENSMUST00000185126 56 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm29452-201ENSMUST00000187996 313 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm29229-201ENSMUST00000188874 323 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Mir340-201ENSMUST00000083483 98 ntBASIC2.83□□□□□ -1.96
Hmgb1P63158 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Hmgb1P63158 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm11859-201ENSMUST00000118099 455 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm15067-201ENSMUST00000119534 156 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm23600-201ENSMUST00000157260 71 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Snord87-201ENSMUST00000175437 87 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm25253-201ENSMUST00000179958 107 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm2719-201ENSMUST00000191929 444 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm26265-202ENSMUST00000196326 133 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm44960-201ENSMUST00000207403 141 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm44654-201ENSMUST00000208052 329 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.82□□□□□ -1.96
Hmgb1P63158 Gm24436-201ENSMUST00000157889 302 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm23223-201ENSMUST00000158119 127 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm22768-201ENSMUST00000158366 153 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm25490-201ENSMUST00000158734 130 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm25528-201ENSMUST00000180264 132 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm26864-201ENSMUST00000181346 156 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm37104-201ENSMUST00000193278 196 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm23404-201ENSMUST00000082543 97 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm22972-201ENSMUST00000083297 131 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Mir429-201ENSMUST00000083493 83 ntBASIC2.81□□□□□ -1.96
Hmgb1P63158 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Hmgb1P63158 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm24127-201ENSMUST00000104110 130 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Snora36b-201ENSMUST00000104383 132 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm14678-201ENSMUST00000121396 482 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm26027-201ENSMUST00000122725 268 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm23172-201ENSMUST00000157160 124 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm20477-201ENSMUST00000174028 280 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Hmgb1P63158 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm25578-201ENSMUST00000083406 104 ntBASIC2.8□□□□□ -1.96
Hmgb1P63158 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Hmgb1P63158 Gm23015-201ENSMUST00000104145 128 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm25421-201ENSMUST00000104218 164 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm13443-201ENSMUST00000120770 555 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.79□□□□□ -1.96
Hmgb1P63158 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm26435-201ENSMUST00000179026 107 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm24390-201ENSMUST00000179578 62 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm5900-201ENSMUST00000179862 375 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.79□□□□□ -1.96
Hmgb1P63158 Gm24805-201ENSMUST00000082931 104 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms