Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.82□□□□□ -1.8
Col18a1P39061 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col18a1P39061 Gm14591-201ENSMUST00000120407 518 ntBASIC3.82□□□□□ -1.8
Col18a1P39061 Gm28057-201ENSMUST00000186603 615 ntBASIC3.82□□□□□ -1.8
Col18a1P39061 Gm45492-201ENSMUST00000211611 288 ntBASIC3.82□□□□□ -1.8
Col18a1P39061 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.82□□□□□ -1.8
Col18a1P39061 Mir384-201ENSMUST00000083565 88 ntBASIC3.82□□□□□ -1.8
Col18a1P39061 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col18a1P39061 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col18a1P39061 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col18a1P39061 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col18a1P39061 Gm14694-201ENSMUST00000121856 282 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm22217-201ENSMUST00000157556 313 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm22665-201ENSMUST00000158720 275 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.81□□□□□ -1.8
Col18a1P39061 Gm27220-201ENSMUST00000183453 262 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm44308-201ENSMUST00000197080 99 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm42844-201ENSMUST00000200355 112 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm44030-201ENSMUST00000204865 432 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm45101-201ENSMUST00000208327 232 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm45445-201ENSMUST00000209586 232 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm23517-201ENSMUST00000082830 192 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.81□□□□□ -1.8
Col18a1P39061 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col18a1P39061 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col18a1P39061 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col18a1P39061 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col18a1P39061 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm26147-201ENSMUST00000104479 114 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm22345-201ENSMUST00000122644 107 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm24141-201ENSMUST00000122776 115 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm25883-201ENSMUST00000157781 271 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm22775-201ENSMUST00000177630 120 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm23569-201ENSMUST00000180120 120 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Mir7242-201ENSMUST00000183710 79 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col18a1P39061 Gm37007-201ENSMUST00000194234 319 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.81□□□□□ -1.8
Col18a1P39061 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.81□□□□□ -1.8
Col18a1P39061 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col18a1P39061 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col18a1P39061 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.81□□□□□ -1.8
Col18a1P39061 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col18a1P39061 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
Col18a1P39061 Gm25421-201ENSMUST00000104218 164 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm23551-201ENSMUST00000116852 121 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm14923-201ENSMUST00000118270 155 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm13433-201ENSMUST00000121701 240 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm16490-201ENSMUST00000165299 351 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm27959-201ENSMUST00000185172 111 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm9402-201ENSMUST00000196849 388 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Gm45907-201ENSMUST00000213023 193 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col18a1P39061 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Col18a1P39061 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col18a1P39061 Gm14400-201ENSMUST00000117234 2135 ntBASIC3.8□□□□□ -1.8
Col18a1P39061 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col18a1P39061 Gm22004-201ENSMUST00000101884 107 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Gm26275-201ENSMUST00000157101 268 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col18a1P39061 Gm6462-201ENSMUST00000081488 304 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col18a1P39061 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col18a1P39061 Gm14626-201ENSMUST00000117619 216 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Col18a1P39061 Gm24481-201ENSMUST00000157210 102 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Gm25121-201ENSMUST00000179846 79 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Mir376a-201ENSMUST00000197584 68 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.79□□□□□ -1.8
Col18a1P39061 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col18a1P39061 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col18a1P39061 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col18a1P39061 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col18a1P39061 Gm10730-201ENSMUST00000194097 2723 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm25560-201ENSMUST00000104606 176 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm4916-201ENSMUST00000126139 642 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm24054-201ENSMUST00000158619 105 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm17119-201ENSMUST00000163943 280 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm20526-201ENSMUST00000173416 158 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm28627-201ENSMUST00000186141 453 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.78□□□□□ -1.8
Col18a1P39061 Gm44338-201ENSMUST00000198614 110 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC3.78□□□□□ -1.8
Col18a1P39061 Gm44182-201ENSMUST00000204052 115 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col18a1P39061 Gm24030-201ENSMUST00000083931 164 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col18a1P39061 Gm43466-201ENSMUST00000197836 5214 ntBASIC3.78□□□□□ -1.8
Col18a1P39061 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col18a1P39061 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms