Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm24588-201ENSMUST00000116696 83 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm22519-201ENSMUST00000158270 178 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm25162-201ENSMUST00000158906 159 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Mir7675-201ENSMUST00000184262 58 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm29613-201ENSMUST00000185846 313 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm29544-201ENSMUST00000188860 313 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm28808-201ENSMUST00000190978 313 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Mir208a-201ENSMUST00000083498 83 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Mir33-201ENSMUST00000083531 69 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm34783-201ENSMUST00000209159 303 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm8940-201ENSMUST00000212585 219 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.1□□□□□ -2.43
PrkdcP97313 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
PrkdcP97313 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm14972-201ENSMUST00000121780 364 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm23897-201ENSMUST00000158110 158 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm45146-201ENSMUST00000207108 221 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm45912-201ENSMUST00000210646 543 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC147240.1-201ENSMUST00000218767 431 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC-0.11□□□□□ -2.43
PrkdcP97313 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC-0.11□□□□□ -2.43
PrkdcP97313 Mir467h-201ENSMUST00000116759 121 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm26303-201ENSMUST00000116845 119 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm11367-201ENSMUST00000117802 120 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm22668-201ENSMUST00000158716 260 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm24678-201ENSMUST00000158756 104 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm22527-201ENSMUST00000158816 106 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Mir125b-2-201ENSMUST00000083538 71 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
PrkdcP97313 Mup-ps21-201ENSMUST00000119998 448 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Mir3057-201ENSMUST00000175040 91 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC122465.3-201ENSMUST00000221644 355 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 CT030166.1-201ENSMUST00000222654 357 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC154262.1-201ENSMUST00000225976 286 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
PrkdcP97313 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
PrkdcP97313 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm27878-201ENSMUST00000184000 106 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm45614-201ENSMUST00000209994 721 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 AC102352.1-201ENSMUST00000224187 582 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Snord1a-201ENSMUST00000083160 74 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm24456-201ENSMUST00000083198 107 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Gm22293-201ENSMUST00000083314 109 ntBASIC-0.11□□□□□ -2.43
PrkdcP97313 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm7329-201ENSMUST00000185915 210 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm29389-201ENSMUST00000191562 352 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 AC165106.2-201ENSMUST00000226749 97 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm23629-201ENSMUST00000082465 107 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm23247-201ENSMUST00000083373 107 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
PrkdcP97313 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC-0.12□□□□□ -2.43
PrkdcP97313 AC157772.2-201ENSMUST00000228202 259 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm26439-201ENSMUST00000082592 106 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm24598-201ENSMUST00000122510 74 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm24965-201ENSMUST00000157922 106 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm24959-201ENSMUST00000157924 146 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC-0.12□□□□□ -2.43
PrkdcP97313 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm24494-201ENSMUST00000083804 81 ntBASIC-0.12□□□□□ -2.43
PrkdcP97313 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm25335-201ENSMUST00000158043 103 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm42925-201ENSMUST00000197359 285 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 AC160031.2-201ENSMUST00000218242 274 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 AC160863.1-201ENSMUST00000218412 317 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm14624-201ENSMUST00000117746 192 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm22706-201ENSMUST00000157907 112 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
PrkdcP97313 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm15211-201ENSMUST00000118932 528 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm23829-201ENSMUST00000157392 270 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm25952-201ENSMUST00000175329 74 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm27861-201ENSMUST00000183920 214 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm28110-201ENSMUST00000185782 315 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm28825-201ENSMUST00000186233 238 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm29057-201ENSMUST00000186468 315 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm28737-201ENSMUST00000186808 315 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm29147-201ENSMUST00000186846 315 ntBASIC-0.13□□□□□ -2.43
PrkdcP97313 Gm29118-201ENSMUST00000186908 315 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms