Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Gm45710-201ENSMUST00000212847 215 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Snord14e-201ENSMUST00000082857 90 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Gm23038-201ENSMUST00000083873 104 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Gm24697-201ENSMUST00000083881 107 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col18a1P39061 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col18a1P39061 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm14868-201ENSMUST00000117840 216 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm25889-201ENSMUST00000157775 107 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm22551-201ENSMUST00000157795 103 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm24075-201ENSMUST00000158175 72 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm27510-201ENSMUST00000158214 64 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm24876-201ENSMUST00000158780 92 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm26097-201ENSMUST00000179642 93 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm44960-201ENSMUST00000207403 141 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.91□□□□□ -1.78
Col18a1P39061 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm23623-201ENSMUST00000082461 107 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 n-R5s205-201ENSMUST00000083149 125 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Mir32-201ENSMUST00000083610 70 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col18a1P39061 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col18a1P39061 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col18a1P39061 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col18a1P39061 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col18a1P39061 Gm23982-201ENSMUST00000157141 106 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm23434-201ENSMUST00000157179 100 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm24916-201ENSMUST00000157287 79 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm28002-201ENSMUST00000184832 100 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.91□□□□□ -1.78
Col18a1P39061 Gm44010-201ENSMUST00000204432 331 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm45315-201ENSMUST00000209283 333 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm22509-201ENSMUST00000082775 107 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Gm24698-201ENSMUST00000083883 130 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.91□□□□□ -1.78
Col18a1P39061 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col18a1P39061 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
Col18a1P39061 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.9□□□□□ -1.78
Col18a1P39061 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Col18a1P39061 Gm24671-201ENSMUST00000104159 158 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Gm22373-201ENSMUST00000104584 89 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Gm14890-201ENSMUST00000117660 676 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Gm16354-201ENSMUST00000155376 150 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Gm23325-201ENSMUST00000157422 129 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Gm23260-201ENSMUST00000158317 172 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Gm26066-201ENSMUST00000083385 109 ntBASIC3.9□□□□□ -1.79
Col18a1P39061 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col18a1P39061 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col18a1P39061 Gm14402-201ENSMUST00000122217 508 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.89□□□□□ -1.79
Col18a1P39061 Gm22113-201ENSMUST00000158343 104 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm38076-201ENSMUST00000193889 450 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm43264-201ENSMUST00000202284 325 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.89□□□□□ -1.79
Col18a1P39061 Gm26446-201ENSMUST00000082455 103 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Mir146-201ENSMUST00000083667 65 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm23741-201ENSMUST00000097237 171 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col18a1P39061 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col18a1P39061 Mir669b-201ENSMUST00000102172 97 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col18a1P39061 Mir6386-201ENSMUST00000183558 104 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm37162-201ENSMUST00000191708 551 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm42988-201ENSMUST00000198116 225 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm43407-201ENSMUST00000199816 317 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Gm45273-201ENSMUST00000211559 281 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.89□□□□□ -1.79
Col18a1P39061 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col18a1P39061 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col18a1P39061 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Col18a1P39061 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col18a1P39061 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col18a1P39061 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col18a1P39061 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.88□□□□□ -1.79
Col18a1P39061 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 Gm44563-201ENSMUST00000207958 178 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 Gm18000-201ENSMUST00000212153 800 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.88□□□□□ -1.79
Col18a1P39061 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.88□□□□□ -1.79
Col18a1P39061 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 Gm25684-201ENSMUST00000083941 107 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.88□□□□□ -1.79
Col18a1P39061 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col18a1P39061 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.88□□□□□ -1.79
Col18a1P39061 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Col18a1P39061 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col18a1P39061 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms