Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
Ubr1O70481 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
Ubr1O70481 Gm11359-201ENSMUST00000120039 567 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm23120-201ENSMUST00000157654 287 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm23589-201ENSMUST00000157660 105 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ubr1O70481 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ubr1O70481 Gm4076-201ENSMUST00000179230 965 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ubr1O70481 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ubr1O70481 Mir6341-201ENSMUST00000183490 121 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Mir3961-201ENSMUST00000198795 59 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm42164-201ENSMUST00000198881 379 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm43529-201ENSMUST00000199178 412 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
Ubr1O70481 Gm25079-201ENSMUST00000082529 203 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm22299-201ENSMUST00000082663 136 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Ubr1O70481 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Ubr1O70481 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm29216-201ENSMUST00000187117 492 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm18546-201ENSMUST00000197245 676 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm43680-201ENSMUST00000199466 340 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.13□□□□□ -2.23
Ubr1O70481 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.13□□□□□ -2.23
Ubr1O70481 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.13□□□□□ -2.23
Ubr1O70481 Gm22689-201ENSMUST00000102452 110 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm26147-201ENSMUST00000104479 114 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm14530-201ENSMUST00000122391 333 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm6956-201ENSMUST00000134724 546 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm22082-201ENSMUST00000157587 161 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm23819-201ENSMUST00000158744 109 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm25633-201ENSMUST00000178565 107 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm27878-201ENSMUST00000184000 106 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm18356-201ENSMUST00000185677 623 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm5116-201ENSMUST00000187732 463 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm29627-201ENSMUST00000187984 463 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 Gm44392-201ENSMUST00000196758 115 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Ubr1O70481 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.12□□□□□ -2.23
Ubr1O70481 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.12□□□□□ -2.23
Ubr1O70481 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.12□□□□□ -2.23
Ubr1O70481 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.12□□□□□ -2.23
Ubr1O70481 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm13885-201ENSMUST00000117569 187 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.11□□□□□ -2.23
Ubr1O70481 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.11□□□□□ -2.23
Ubr1O70481 Gm44358-201ENSMUST00000196301 98 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.11□□□□□ -2.23
Ubr1O70481 Gm19032-201ENSMUST00000208584 592 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm18242-201ENSMUST00000218455 542 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm25495-201ENSMUST00000104431 131 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm23118-201ENSMUST00000122657 187 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Mir1904-201ENSMUST00000122702 80 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm23605-201ENSMUST00000157255 127 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm22583-201ENSMUST00000178031 107 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Ubr1O70481 Gm29603-201ENSMUST00000186792 334 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm18775-201ENSMUST00000190763 586 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm29950-201ENSMUST00000195273 237 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm45375-201ENSMUST00000210338 280 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Gm23517-201ENSMUST00000082830 192 ntBASIC1.11□□□□□ -2.23
Ubr1O70481 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Ubr1O70481 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm25706-201ENSMUST00000157828 247 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm29397-201ENSMUST00000185205 333 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm44482-201ENSMUST00000199232 103 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm44384-201ENSMUST00000200208 114 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm43004-201ENSMUST00000201872 703 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm17911-201ENSMUST00000210806 877 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.1□□□□□ -2.23
Ubr1O70481 Gm15175-201ENSMUST00000117629 132 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm14551-201ENSMUST00000120802 256 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 AA413626-201ENSMUST00000121125 494 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm23172-201ENSMUST00000157160 124 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm22768-201ENSMUST00000158366 153 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm23355-201ENSMUST00000177614 107 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm24464-201ENSMUST00000179697 107 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm27711-201ENSMUST00000183802 118 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm34015-201ENSMUST00000194908 451 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm22997-201ENSMUST00000082845 107 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm23721-201ENSMUST00000083005 107 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm10360-201ENSMUST00000097219 272 ntBASIC1.09□□□□□ -2.23
Ubr1O70481 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Ubr1O70481 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Ubr1O70481 Gm24288-201ENSMUST00000157630 144 ntBASIC1.08□□□□□ -2.24
Ubr1O70481 Gm23858-201ENSMUST00000158384 106 ntBASIC1.08□□□□□ -2.24
Ubr1O70481 Gm23196-201ENSMUST00000158806 107 ntBASIC1.08□□□□□ -2.24
Ubr1O70481 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms