Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm22633-201ENSMUST00000179834 107 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 Gm9022-202ENSMUST00000183285 483 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 Gm27517-201ENSMUST00000184347 236 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 Gm38268-201ENSMUST00000195813 193 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 Gm2829-201ENSMUST00000213121 499 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.19□□□□□ -2.22
Rpa3Q9CQ71 Gm381-201ENSMUST00000117443 2037 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm25068-201ENSMUST00000103895 110 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm23907-201ENSMUST00000104595 189 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm15861-201ENSMUST00000120979 339 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm23184-201ENSMUST00000122594 131 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm23170-201ENSMUST00000157158 106 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm23967-201ENSMUST00000175062 78 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Mir6388-201ENSMUST00000184417 75 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm28956-201ENSMUST00000189047 427 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Mir6962-201ENSMUST00000199512 63 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm22508-201ENSMUST00000082772 110 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm23462-201ENSMUST00000083264 104 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Mir350-201ENSMUST00000083639 99 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm24252-201ENSMUST00000083700 132 ntBASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.18□□□□□ -2.22
Rpa3Q9CQ71 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm8858-201ENSMUST00000118259 342 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm12053-201ENSMUST00000119022 252 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm11606-201ENSMUST00000120706 617 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm13356-201ENSMUST00000121678 335 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Mir1904-201ENSMUST00000122702 80 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm25706-201ENSMUST00000157828 247 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm22668-201ENSMUST00000158716 260 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm24885-201ENSMUST00000158783 270 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm24229-201ENSMUST00000158830 118 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm24111-201ENSMUST00000175491 97 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm27326-201ENSMUST00000183504 95 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Snord14a-201ENSMUST00000082807 87 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm23503-201ENSMUST00000083903 107 ntBASIC1.17□□□□□ -2.22
Rpa3Q9CQ71 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm24598-201ENSMUST00000122510 74 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm24480-201ENSMUST00000157442 103 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm26089-201ENSMUST00000157898 107 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm27711-201ENSMUST00000183802 118 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Mir6419-201ENSMUST00000184784 113 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm44615-201ENSMUST00000206548 358 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm45207-201ENSMUST00000207469 145 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm44654-201ENSMUST00000208052 329 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm18703-201ENSMUST00000215318 333 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm24045-201ENSMUST00000083113 98 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Mir10a-201ENSMUST00000083585 110 ntBASIC1.16□□□□□ -2.22
Rpa3Q9CQ71 Gm14765-201ENSMUST00000121954 326 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Gm22663-201ENSMUST00000158721 102 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Gm23636-201ENSMUST00000175070 95 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Mir7665-201ENSMUST00000184907 63 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Mir703-201ENSMUST00000197105 109 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Gm25636-201ENSMUST00000082666 133 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Snora3-201ENSMUST00000083082 132 ntBASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Rpa3Q9CQ71 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm12639-201ENSMUST00000121400 493 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm24896-201ENSMUST00000122741 135 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm22236-201ENSMUST00000157093 106 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm25059-201ENSMUST00000157367 117 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm22597-201ENSMUST00000157602 80 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm23641-201ENSMUST00000157857 101 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm24851-201ENSMUST00000158028 103 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm23858-201ENSMUST00000158384 106 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Traj60-201ENSMUST00000167781 54 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm23862-201ENSMUST00000180342 94 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Mir6381-201ENSMUST00000183426 87 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Mir6355-201ENSMUST00000183687 106 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm44392-201ENSMUST00000196758 115 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm42164-201ENSMUST00000198881 379 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 201.8 ms