Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col18a1P39061 Gm25500-201ENSMUST00000104426 123 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Col18a1P39061 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.97□□□□□ -1.77
Col18a1P39061 Gm22321-201ENSMUST00000157152 104 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 Gm22257-201ENSMUST00000158687 301 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 Gm29022-201ENSMUST00000190702 225 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 Gm19244-201ENSMUST00000204340 253 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 Gm7422-201ENSMUST00000220115 640 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 LOC667541-201ENSMUST00000223408 278 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.97□□□□□ -1.77
Col18a1P39061 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.96□□□□□ -1.77
Col18a1P39061 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm11065-201ENSMUST00000111462 228 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm14593-201ENSMUST00000119948 294 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col18a1P39061 Gm23902-201ENSMUST00000157571 134 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm22540-201ENSMUST00000158168 117 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm23002-201ENSMUST00000179221 107 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm42666-201ENSMUST00000201954 152 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm19761-201ENSMUST00000205372 391 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm45403-201ENSMUST00000209453 276 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Gm25851-201ENSMUST00000082794 107 ntBASIC3.96□□□□□ -1.78
Col18a1P39061 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col18a1P39061 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col18a1P39061 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col18a1P39061 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 Gm23230-201ENSMUST00000157298 133 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 Mir1966-201ENSMUST00000158807 108 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 Gm24666-201ENSMUST00000158937 167 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 Gm24082-201ENSMUST00000175175 83 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 Gm43602-201ENSMUST00000196772 300 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 Gm44446-201ENSMUST00000204864 255 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.95□□□□□ -1.78
Col18a1P39061 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Col18a1P39061 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col18a1P39061 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col18a1P39061 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col18a1P39061 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col18a1P39061 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm13714-201ENSMUST00000117313 221 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm13457-201ENSMUST00000117885 267 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm15497-201ENSMUST00000119137 551 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm15244-201ENSMUST00000121122 130 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC3.94□□□□□ -1.78
Col18a1P39061 Gm22315-201ENSMUST00000158010 143 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm23895-201ENSMUST00000158108 160 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm25162-201ENSMUST00000158906 159 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm26701-201ENSMUST00000181571 234 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm37713-201ENSMUST00000191746 198 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col18a1P39061 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col18a1P39061 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col18a1P39061 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
Col18a1P39061 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col18a1P39061 Gm22116-201ENSMUST00000158791 141 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.94□□□□□ -1.78
Col18a1P39061 Gm25820-201ENSMUST00000198589 127 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Gm9174-201ENSMUST00000078149 255 ntBASIC3.94□□□□□ -1.78
Col18a1P39061 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col18a1P39061 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col18a1P39061 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Col18a1P39061 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Col18a1P39061 Gm26500-201ENSMUST00000101867 106 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm26293-201ENSMUST00000104170 84 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm12954-201ENSMUST00000118610 611 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.93□□□□□ -1.78
Col18a1P39061 Gm24926-201ENSMUST00000178053 79 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm22632-201ENSMUST00000178266 79 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm37377-201ENSMUST00000191733 304 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm37692-201ENSMUST00000192633 232 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm6615-201ENSMUST00000199426 631 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm45778-201ENSMUST00000211959 153 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm22685-201ENSMUST00000082848 106 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Mir504-201ENSMUST00000093602 79 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Col18a1P39061 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col18a1P39061 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.93□□□□□ -1.78
Col18a1P39061 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Gm22961-201ENSMUST00000157964 106 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col18a1P39061 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.92□□□□□ -1.78
Col18a1P39061 Gm30341-201ENSMUST00000194363 289 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Gm43284-201ENSMUST00000200103 253 ntBASIC3.92□□□□□ -1.78
Col18a1P39061 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 193.1 ms