Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm24698-201ENSMUST00000083883 130 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm13439-201ENSMUST00000117541 409 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm22330-201ENSMUST00000158068 115 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm22435-201ENSMUST00000158552 128 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm3470-201ENSMUST00000160819 420 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm25121-201ENSMUST00000179846 79 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm20257-202ENSMUST00000188643 130 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm45119-201ENSMUST00000207612 199 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Gm9370-201ENSMUST00000222787 609 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Mir300-201ENSMUST00000083485 79 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.1□□□□□ -1.91
Hmgb1P63158 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb1P63158 Gm24787-201ENSMUST00000157380 123 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 Gm24726-201ENSMUST00000158232 121 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 Gm24736-201ENSMUST00000158862 130 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.09□□□□□ -1.91
Hmgb1P63158 Gm43669-201ENSMUST00000198229 436 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.09□□□□□ -1.91
Hmgb1P63158 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb1P63158 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.09□□□□□ -1.91
Hmgb1P63158 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb1P63158 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Hmgb1P63158 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Hmgb1P63158 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Hmgb1P63158 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb1P63158 Gm22713-201ENSMUST00000116895 130 ntBASIC3.08□□□□□ -1.92
Hmgb1P63158 Gm24896-201ENSMUST00000122741 135 ntBASIC3.08□□□□□ -1.92
Hmgb1P63158 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.08□□□□□ -1.92
Hmgb1P63158 Gm23409-201ENSMUST00000158516 237 ntBASIC3.08□□□□□ -1.92
Hmgb1P63158 Snord53-201ENSMUST00000175146 78 ntBASIC3.08□□□□□ -1.92
Hmgb1P63158 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
Hmgb1P63158 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.08□□□□□ -1.92
Hmgb1P63158 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.08□□□□□ -1.92
Hmgb1P63158 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.08□□□□□ -1.92
Hmgb1P63158 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Hmgb1P63158 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Hmgb1P63158 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm25466-201ENSMUST00000103995 132 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm13504-201ENSMUST00000117490 316 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm16171-201ENSMUST00000118004 324 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm23983-201ENSMUST00000157142 114 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm24443-201ENSMUST00000157242 132 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm24314-201ENSMUST00000158274 123 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Mir6353-201ENSMUST00000183596 113 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Mir6408-201ENSMUST00000183643 91 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm38050-201ENSMUST00000191904 238 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm43264-201ENSMUST00000202284 325 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.07□□□□□ -1.92
Hmgb1P63158 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm26458-201ENSMUST00000082832 128 ntBASIC3.07□□□□□ -1.92
Hmgb1P63158 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
Hmgb1P63158 Mir673-201ENSMUST00000102361 91 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm26088-201ENSMUST00000157896 131 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm24499-201ENSMUST00000158446 104 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm7953-201ENSMUST00000168278 469 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm25470-201ENSMUST00000175576 111 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb1P63158 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm44429-201ENSMUST00000203542 186 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb1P63158 Gm7495-201ENSMUST00000215099 426 ntBASIC3.06□□□□□ -1.92
Hmgb1P63158 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb1P63158 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb1P63158 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb1P63158 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb1P63158 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm23911-201ENSMUST00000104596 134 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm24598-201ENSMUST00000122510 74 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm24005-201ENSMUST00000158459 296 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm16038-201ENSMUST00000159317 193 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm27330-201ENSMUST00000184689 132 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm37353-201ENSMUST00000194497 313 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm44149-201ENSMUST00000204256 226 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb1P63158 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm22978-201ENSMUST00000082607 160 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm26056-201ENSMUST00000083043 104 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm24412-201ENSMUST00000083426 109 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm26175-201ENSMUST00000083794 131 ntBASIC3.05□□□□□ -1.92
Hmgb1P63158 Gm14405-201ENSMUST00000117808 2330 ntBASIC3.04□□□□□ -1.92
Hmgb1P63158 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.04□□□□□ -1.92
Hmgb1P63158 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.04□□□□□ -1.92
Hmgb1P63158 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 154.3 ms