Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.85□□□□□ -2.27
Cacna1bO55017 Gm5329-201ENSMUST00000186898 463 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.85□□□□□ -2.27
Cacna1bO55017 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 Gm42647-201ENSMUST00000195939 459 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 Gm44483-201ENSMUST00000197203 97 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.85□□□□□ -2.27
Cacna1bO55017 Snord43-201ENSMUST00000199549 108 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 Gm25697-201ENSMUST00000082902 98 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.85□□□□□ -2.27
Cacna1bO55017 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.85□□□□□ -2.27
Cacna1bO55017 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Cacna1bO55017 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Cacna1bO55017 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm14833-201ENSMUST00000118345 1027 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm6664-201ENSMUST00000119138 468 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm14989-201ENSMUST00000120497 207 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm13246-201ENSMUST00000120994 315 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm12045-201ENSMUST00000122122 573 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm2020-201ENSMUST00000145242 579 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm16129-201ENSMUST00000152628 486 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm23381-201ENSMUST00000157676 94 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm22315-201ENSMUST00000158010 143 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm36966-201ENSMUST00000192217 413 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm44459-201ENSMUST00000203926 160 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm45387-201ENSMUST00000209792 632 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm45439-201ENSMUST00000211723 359 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Olfr197-201ENSMUST00000080031 926 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm23650-201ENSMUST00000083355 70 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Cacna1bO55017 AC117226.1-201ENSMUST00000221635 3737 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.84□□□□□ -2.27
Cacna1bO55017 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Cacna1bO55017 Gm25313-201ENSMUST00000101817 116 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm25885-201ENSMUST00000157779 109 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm24846-201ENSMUST00000158033 108 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm23287-201ENSMUST00000179427 116 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm24137-201ENSMUST00000180055 79 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm23143-201ENSMUST00000180137 116 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm22391-201ENSMUST00000180356 79 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm19891-201ENSMUST00000189771 303 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm45071-201ENSMUST00000205353 571 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm24920-201ENSMUST00000083018 85 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm24871-201ENSMUST00000083099 116 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm23848-201ENSMUST00000083826 106 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Rnu5g-201ENSMUST00000093721 116 ntBASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Cacna1bO55017 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm14359-201ENSMUST00000118883 424 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm14748-201ENSMUST00000119819 411 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm14360-201ENSMUST00000120670 393 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm9498-201ENSMUST00000140849 291 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm14368-201ENSMUST00000145305 415 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm24476-201ENSMUST00000157437 131 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm16546-201ENSMUST00000159442 355 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Mir6370-201ENSMUST00000183510 120 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Mir7667-201ENSMUST00000183866 63 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Cacna1bO55017 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm18242-201ENSMUST00000218455 542 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 AC149294.9-201ENSMUST00000227256 164 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm24610-201ENSMUST00000083270 109 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm22091-201ENSMUST00000116908 127 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm6587-201ENSMUST00000120219 613 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm14629-201ENSMUST00000122428 144 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm38154-201ENSMUST00000195444 340 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm44125-201ENSMUST00000203068 448 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm44050-201ENSMUST00000204263 527 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm45754-201ENSMUST00000212380 279 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm46136-201ENSMUST00000214730 565 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm23645-201ENSMUST00000083228 108 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Mir300-201ENSMUST00000083485 79 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Mir301-201ENSMUST00000083655 86 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm23741-201ENSMUST00000097237 171 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.83□□□□□ -2.28
Cacna1bO55017 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.82□□□□□ -2.28
Cacna1bO55017 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Cacna1bO55017 Mir467h-201ENSMUST00000116759 121 ntBASIC0.82□□□□□ -2.28
Cacna1bO55017 Gm14774-201ENSMUST00000117857 536 ntBASIC0.82□□□□□ -2.28
Cacna1bO55017 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 388.7 ms