Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.86■□□□□ 0.13
Ctla4P09793 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.86■□□□□ 0.13
Ctla4P09793 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.86■□□□□ 0.13
Ctla4P09793 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctla4P09793 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ctla4P09793 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.85■□□□□ 0.13
Ctla4P09793 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.85■□□□□ 0.13
Ctla4P09793 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.85■□□□□ 0.13
Ctla4P09793 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ctla4P09793 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctla4P09793 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctla4P09793 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Ctla4P09793 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ctla4P09793 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctla4P09793 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ctla4P09793 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.84■□□□□ 0.13
Ctla4P09793 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.84■□□□□ 0.13
Ctla4P09793 Gm8969-201ENSMUST00000199694 526 ntBASIC15.84■□□□□ 0.13
Ctla4P09793 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Gm7370-201ENSMUST00000219471 767 ntBASIC15.84■□□□□ 0.13
Ctla4P09793 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.84■□□□□ 0.13
Ctla4P09793 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ctla4P09793 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctla4P09793 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctla4P09793 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ctla4P09793 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ctla4P09793 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ctla4P09793 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctla4P09793 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.83■□□□□ 0.12
Ctla4P09793 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.83■□□□□ 0.12
Ctla4P09793 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Ctla4P09793 Gm16061-201ENSMUST00000122167 857 ntBASIC15.83■□□□□ 0.12
Ctla4P09793 Gm18958-201ENSMUST00000174258 762 ntBASIC15.83■□□□□ 0.12
Ctla4P09793 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.83■□□□□ 0.12
Ctla4P09793 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.83■□□□□ 0.12
Ctla4P09793 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ctla4P09793 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctla4P09793 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ctla4P09793 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ctla4P09793 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctla4P09793 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctla4P09793 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctla4P09793 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctla4P09793 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.82■□□□□ 0.12
Ctla4P09793 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ctla4P09793 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.82■□□□□ 0.12
Ctla4P09793 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ctla4P09793 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.82■□□□□ 0.12
Ctla4P09793 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctla4P09793 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms