Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm14579-201ENSMUST00000117068 283 ntBASIC3.18□□□□□ -1.9
Hmgb1P63158 Gm15010-201ENSMUST00000117153 407 ntBASIC3.18□□□□□ -1.9
Hmgb1P63158 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC3.18□□□□□ -1.9
Hmgb1P63158 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb1P63158 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.18□□□□□ -1.9
Hmgb1P63158 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb1P63158 Gm24085-201ENSMUST00000175172 116 ntBASIC3.18□□□□□ -1.9
Hmgb1P63158 Gm27878-201ENSMUST00000184000 106 ntBASIC3.18□□□□□ -1.9
Hmgb1P63158 Gm43865-201ENSMUST00000204721 127 ntBASIC3.18□□□□□ -1.9
Hmgb1P63158 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.18□□□□□ -1.9
Hmgb1P63158 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb1P63158 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb1P63158 Gm25059-201ENSMUST00000157367 117 ntBASIC3.17□□□□□ -1.9
Hmgb1P63158 Gm29005-201ENSMUST00000186773 320 ntBASIC3.17□□□□□ -1.9
Hmgb1P63158 Gm45522-201ENSMUST00000210784 166 ntBASIC3.17□□□□□ -1.9
Hmgb1P63158 Mir499-201ENSMUST00000102357 79 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm22277-201ENSMUST00000157204 277 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm28414-201ENSMUST00000190111 294 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm37845-201ENSMUST00000194977 355 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm32222-201ENSMUST00000203296 298 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Rny3-201ENSMUST00000083011 102 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgb1P63158 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb1P63158 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.16□□□□□ -1.9
Hmgb1P63158 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.15□□□□□ -1.9
Hmgb1P63158 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Hmgb1P63158 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Hmgb1P63158 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm26396-201ENSMUST00000104093 132 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm25970-201ENSMUST00000157165 86 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm25115-201ENSMUST00000157187 140 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm22316-201ENSMUST00000158012 216 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm24810-201ENSMUST00000175317 70 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm20613-201ENSMUST00000175828 345 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Hmgb1P63158 Mir6926-201ENSMUST00000184562 68 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm37007-201ENSMUST00000194234 319 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm44966-201ENSMUST00000208096 157 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.15□□□□□ -1.91
Hmgb1P63158 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hmgb1P63158 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Hmgb1P63158 Gm24480-201ENSMUST00000157442 103 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 Gm21827-201ENSMUST00000178247 423 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 Gm25589-201ENSMUST00000082502 166 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 Gm25124-201ENSMUST00000083345 164 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 Mir29c-201ENSMUST00000083614 88 ntBASIC3.14□□□□□ -1.91
Hmgb1P63158 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Hmgb1P63158 Gm37895-201ENSMUST00000192448 4550 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm22939-201ENSMUST00000103958 131 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm24282-201ENSMUST00000104232 66 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm12617-201ENSMUST00000121268 381 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm22037-201ENSMUST00000157280 296 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm23660-201ENSMUST00000178362 79 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Hmga1b-202ENSMUST00000178955 120 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm24088-201ENSMUST00000179100 79 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.13□□□□□ -1.91
Hmgb1P63158 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm14588-201ENSMUST00000119895 172 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm22073-201ENSMUST00000122668 189 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm24475-201ENSMUST00000157435 143 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm24553-201ENSMUST00000158653 131 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.12□□□□□ -1.91
Hmgb1P63158 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Mir7093-201ENSMUST00000184195 101 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Mir6975-201ENSMUST00000184879 61 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm28058-201ENSMUST00000186421 264 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb1P63158 Mir423-201ENSMUST00000083584 109 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm26314-201ENSMUST00000083891 107 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Gm43484-201ENSMUST00000198333 5966 ntBASIC3.12□□□□□ -1.91
Hmgb1P63158 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb1P63158 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hmgb1P63158 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm15272-201ENSMUST00000120865 233 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm23895-201ENSMUST00000158108 160 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Snord93-201ENSMUST00000175580 71 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm9892-201ENSMUST00000182415 992 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb1P63158 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm44482-201ENSMUST00000199232 103 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.11□□□□□ -1.91
Hmgb1P63158 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 Gm45704-201ENSMUST00000212582 403 ntBASIC3.11□□□□□ -1.91
Hmgb1P63158 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms