Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col18a1P39061 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Col18a1P39061 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col18a1P39061 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col18a1P39061 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Mir701-201ENSMUST00000102208 109 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col18a1P39061 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Gm15282-201ENSMUST00000117707 300 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Gm11204-201ENSMUST00000122438 147 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Gm24650-201ENSMUST00000157105 103 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Mir669j-201ENSMUST00000179023 121 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col18a1P39061 Gm22293-201ENSMUST00000083314 109 ntBASIC4.05□□□□□ -1.76
Col18a1P39061 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col18a1P39061 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Col18a1P39061 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col18a1P39061 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col18a1P39061 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col18a1P39061 Gm14771-201ENSMUST00000118249 203 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm13155-201ENSMUST00000119277 646 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm14586-201ENSMUST00000119571 408 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm8178-201ENSMUST00000121570 646 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm25615-201ENSMUST00000177836 94 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Mir6540-201ENSMUST00000184886 108 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC4.04□□□□□ -1.76
Col18a1P39061 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.04□□□□□ -1.76
Col18a1P39061 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 AC165415.1-201ENSMUST00000228924 273 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Mir452-201ENSMUST00000093629 85 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col18a1P39061 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col18a1P39061 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col18a1P39061 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col18a1P39061 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm23128-201ENSMUST00000104257 132 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm15029-201ENSMUST00000119742 199 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm8880-201ENSMUST00000121800 454 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm25863-201ENSMUST00000158249 329 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm22606-201ENSMUST00000158290 103 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm22699-201ENSMUST00000175376 105 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm7909-201ENSMUST00000182688 614 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm23128-202ENSMUST00000196578 133 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Gm45367-201ENSMUST00000210171 347 ntBASIC4.04□□□□□ -1.76
Col18a1P39061 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
Col18a1P39061 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col18a1P39061 Gm14657-201ENSMUST00000117461 302 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm23232-201ENSMUST00000157300 105 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm23557-201ENSMUST00000157820 138 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm26352-201ENSMUST00000158223 125 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm25015-201ENSMUST00000158400 128 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm20450-201ENSMUST00000173652 147 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm24168-201ENSMUST00000178825 107 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Mir6715-201ENSMUST00000184990 57 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm18698-201ENSMUST00000192327 668 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm43583-201ENSMUST00000199235 303 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col18a1P39061 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col18a1P39061 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.03□□□□□ -1.76
Col18a1P39061 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col18a1P39061 Gm18617-201ENSMUST00000222311 259 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col18a1P39061 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col18a1P39061 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.03□□□□□ -1.76
Col18a1P39061 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.03□□□□□ -1.77
Col18a1P39061 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.03□□□□□ -1.77
Col18a1P39061 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.03□□□□□ -1.77
Col18a1P39061 Gm26341-201ENSMUST00000104561 134 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm8260-201ENSMUST00000119230 353 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm23463-201ENSMUST00000122468 99 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm26149-201ENSMUST00000157432 108 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col18a1P39061 Gm24487-201ENSMUST00000178017 63 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm20257-202ENSMUST00000188643 130 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm19901-201ENSMUST00000192191 495 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm43206-201ENSMUST00000197990 114 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm45031-201ENSMUST00000206800 288 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Col18a1P39061 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col18a1P39061 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col18a1P39061 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
Col18a1P39061 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col18a1P39061 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col18a1P39061 Gm26051-201ENSMUST00000104642 93 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm14142-201ENSMUST00000117833 296 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm5384-201ENSMUST00000120313 463 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm12723-201ENSMUST00000120700 451 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm22450-201ENSMUST00000179641 107 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm44319-201ENSMUST00000196974 93 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm25820-202ENSMUST00000197479 128 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm24521-201ENSMUST00000083958 107 ntBASIC4.02□□□□□ -1.77
Col18a1P39061 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.01□□□□□ -1.77
Col18a1P39061 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.01□□□□□ -1.77
Col18a1P39061 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 163.6 ms