Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm22768-201ENSMUST00000158366 153 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm16147-201ENSMUST00000162143 373 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm36997-201ENSMUST00000195090 707 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm42796-201ENSMUST00000199913 1087 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm45704-201ENSMUST00000212582 403 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm15037-201ENSMUST00000120358 259 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Mir6338-201ENSMUST00000183389 109 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.07□□□□□ -2.4
PrkdcP97313 AC126043.1-201ENSMUST00000221304 1141 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm10092-201ENSMUST00000077110 180 ntBASIC0.07□□□□□ -2.4
PrkdcP97313 Gm22785-201ENSMUST00000104087 132 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm7346-201ENSMUST00000169661 476 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm37098-201ENSMUST00000192290 244 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm37002-201ENSMUST00000194560 373 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm17991-201ENSMUST00000208139 297 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21809-201ENSMUST00000178495 468 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm42807-201ENSMUST00000200141 329 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm44803-201ENSMUST00000204384 156 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm23455-201ENSMUST00000083331 100 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Mir19b-1-201ENSMUST00000102301 87 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm13541-201ENSMUST00000119519 283 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm12368-201ENSMUST00000122251 434 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20794-201ENSMUST00000177626 628 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm29397-201ENSMUST00000185205 333 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm28356-202ENSMUST00000187566 858 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20885-201ENSMUST00000190192 654 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.06□□□□□ -2.4
PrkdcP97313 Gm33571-201ENSMUST00000193271 657 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm36866-201ENSMUST00000193343 657 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm36047-201ENSMUST00000193659 657 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20857-201ENSMUST00000194766 657 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm20858-201ENSMUST00000195459 657 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm30638-201ENSMUST00000195570 656 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.06□□□□□ -2.4
PrkdcP97313 Gm2348-201ENSMUST00000108782 300 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
PrkdcP97313 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm37576-201ENSMUST00000194228 372 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
PrkdcP97313 Gm26038-201ENSMUST00000158151 106 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm24549-201ENSMUST00000158647 139 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Mir3086-201ENSMUST00000175072 87 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm7858-201ENSMUST00000190177 622 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
PrkdcP97313 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
PrkdcP97313 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
PrkdcP97313 Gm11904-201ENSMUST00000120562 248 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm14765-201ENSMUST00000121954 326 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm25060-201ENSMUST00000157374 130 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm24419-201ENSMUST00000157875 332 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
PrkdcP97313 Gm27943-201ENSMUST00000184844 116 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Gm42976-201ENSMUST00000200313 222 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
PrkdcP97313 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.05□□□□□ -2.4
PrkdcP97313 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
PrkdcP97313 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm12392-201ENSMUST00000118014 938 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm24333-201ENSMUST00000175101 84 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm27884-201ENSMUST00000183865 76 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm37319-201ENSMUST00000193500 636 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm42625-201ENSMUST00000198611 922 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm43974-201ENSMUST00000205080 684 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
PrkdcP97313 Gm26275-201ENSMUST00000157101 268 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm44455-201ENSMUST00000200061 82 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
PrkdcP97313 Gm24091-201ENSMUST00000082550 83 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm23711-201ENSMUST00000083856 83 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm23761-201ENSMUST00000158347 104 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
PrkdcP97313 Gm21171-201ENSMUST00000180048 673 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm20811-201ENSMUST00000190500 553 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.04□□□□□ -2.4
PrkdcP97313 Gm25703-201ENSMUST00000083123 151 ntBASIC0.04□□□□□ -2.4
PrkdcP97313 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
PrkdcP97313 Gm26101-201ENSMUST00000157246 105 ntBASIC0.03□□□□□ -2.4
PrkdcP97313 Gm23208-201ENSMUST00000158666 127 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 187.7 ms