Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Hmgb1P63158 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.24□□□□□ -1.89
Hmgb1P63158 Gm36953-201ENSMUST00000195295 268 ntBASIC3.24□□□□□ -1.89
Hmgb1P63158 Gm44964-201ENSMUST00000207011 273 ntBASIC3.24□□□□□ -1.89
Hmgb1P63158 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Hmgb1P63158 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Hmgb1P63158 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb1P63158 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Hmgb1P63158 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.23□□□□□ -1.89
Hmgb1P63158 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm22308-201ENSMUST00000177609 107 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm23191-201ENSMUST00000179147 107 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm28925-201ENSMUST00000188586 168 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm43914-201ENSMUST00000203592 594 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm43932-201ENSMUST00000204499 52 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm45386-201ENSMUST00000210194 218 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm22997-201ENSMUST00000082845 107 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Mir93-201ENSMUST00000083593 88 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.23□□□□□ -1.89
Hmgb1P63158 Gm23324-201ENSMUST00000157421 131 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.22□□□□□ -1.89
Hmgb1P63158 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm18291-201ENSMUST00000190791 301 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm37128-201ENSMUST00000192599 232 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm43583-201ENSMUST00000199235 303 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm43393-201ENSMUST00000200147 194 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm44564-201ENSMUST00000207985 180 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm44666-201ENSMUST00000208544 391 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm25896-201ENSMUST00000083713 136 ntBASIC3.22□□□□□ -1.89
Hmgb1P63158 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb1P63158 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Hmgb1P63158 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.21□□□□□ -1.9
Hmgb1P63158 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm24907-201ENSMUST00000116932 128 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm26277-201ENSMUST00000157097 152 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm22416-201ENSMUST00000158590 88 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm25119-201ENSMUST00000158815 88 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm25368-201ENSMUST00000158847 131 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm26180-201ENSMUST00000179942 107 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm19694-201ENSMUST00000192364 505 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm43723-201ENSMUST00000196886 189 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm43676-201ENSMUST00000197532 540 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm3724-201ENSMUST00000197957 349 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm45403-201ENSMUST00000209453 276 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm46389-201ENSMUST00000223199 392 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm24044-201ENSMUST00000083107 156 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Mir27a-201ENSMUST00000083510 87 ntBASIC3.21□□□□□ -1.9
Hmgb1P63158 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.21□□□□□ -1.9
Hmgb1P63158 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Hmgb1P63158 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb1P63158 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm42536-201ENSMUST00000197562 1613 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm23667-201ENSMUST00000157466 120 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm26157-201ENSMUST00000158974 126 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm16111-201ENSMUST00000162128 285 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb1P63158 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Snora23-201ENSMUST00000082517 184 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Gm26164-201ENSMUST00000083793 104 ntBASIC3.2□□□□□ -1.9
Hmgb1P63158 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb1P63158 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Hmgb1P63158 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb1P63158 Mir701-201ENSMUST00000102208 109 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Gm14296-202ENSMUST00000108931 750 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.19□□□□□ -1.9
Hmgb1P63158 Gm23325-201ENSMUST00000157422 129 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Gm24837-201ENSMUST00000158683 81 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgb1P63158 Mir6907-201ENSMUST00000183764 71 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Gm25788-201ENSMUST00000082721 131 ntBASIC3.19□□□□□ -1.9
Hmgb1P63158 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb1P63158 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 250 ms