Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm26393-201ENSMUST00000157625 129 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm22841-201ENSMUST00000158443 62 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm16584-201ENSMUST00000159267 189 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm24418-201ENSMUST00000177597 79 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm24639-201ENSMUST00000178518 79 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm23076-201ENSMUST00000179082 79 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm25077-201ENSMUST00000179157 79 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm28627-201ENSMUST00000186141 453 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm37119-201ENSMUST00000195691 389 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm9318-201ENSMUST00000222444 438 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm25130-201ENSMUST00000082650 156 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.05□□□□□ -2.08
Lrif1Q8CDD9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm24049-201ENSMUST00000102409 100 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm12956-201ENSMUST00000122184 414 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm23184-201ENSMUST00000122594 131 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm24438-201ENSMUST00000157893 115 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm27957-201ENSMUST00000184054 127 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm28597-201ENSMUST00000187664 666 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm37658-201ENSMUST00000192672 315 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm9377-201ENSMUST00000207227 623 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Gm23040-201ENSMUST00000083869 163 ntBASIC2.04□□□□□ -2.08
Lrif1Q8CDD9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm12225-201ENSMUST00000117995 298 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm23469-201ENSMUST00000157131 104 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm44938-201ENSMUST00000208614 427 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Lrif1Q8CDD9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm14293-201ENSMUST00000118528 577 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm11891-201ENSMUST00000121241 619 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm24997-201ENSMUST00000157910 105 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm24885-201ENSMUST00000158783 270 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm37361-201ENSMUST00000194345 132 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm44142-201ENSMUST00000203358 311 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm22620-201ENSMUST00000082700 133 ntBASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lrif1Q8CDD9 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm26077-201ENSMUST00000104064 123 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm24984-201ENSMUST00000104454 133 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm15896-201ENSMUST00000118045 440 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm12779-201ENSMUST00000121496 143 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm11363-201ENSMUST00000121672 548 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm25961-201ENSMUST00000157174 135 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm23342-201ENSMUST00000158958 115 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm23725-201ENSMUST00000177876 107 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Trbv18-201ENSMUST00000194256 294 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm44024-201ENSMUST00000203008 476 ntBASIC2.01□□□□□ -2.09
Lrif1Q8CDD9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 180 ms