Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb1P63158 Gm37085-201ENSMUST00000193780 196 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Gm44128-201ENSMUST00000204909 219 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Gm45678-201ENSMUST00000210509 295 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Gm25592-201ENSMUST00000082635 131 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Gm22739-201ENSMUST00000083437 160 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Mir184-201ENSMUST00000083662 69 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.32□□□□□ -1.88
Hmgb1P63158 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hmgb1P63158 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.32□□□□□ -1.88
Hmgb1P63158 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb1P63158 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb1P63158 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm14624-201ENSMUST00000117746 192 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm14748-201ENSMUST00000119819 411 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm21737-201ENSMUST00000178112 664 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm26297-201ENSMUST00000179464 132 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm20901-201ENSMUST00000180177 664 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Mir6399-201ENSMUST00000184050 84 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm28090-201ENSMUST00000189458 664 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm21647-201ENSMUST00000189755 664 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm42807-201ENSMUST00000200141 329 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.31□□□□□ -1.88
Hmgb1P63158 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm23297-201ENSMUST00000083184 127 ntBASIC3.31□□□□□ -1.88
Hmgb1P63158 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hmgb1P63158 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Hmgb1P63158 Gm14797-201ENSMUST00000119378 1480 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm11512-201ENSMUST00000119669 663 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm14269-201ENSMUST00000120455 306 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm23168-201ENSMUST00000157156 143 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm25488-201ENSMUST00000158728 118 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm42672-201ENSMUST00000197821 352 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm46233-201ENSMUST00000217831 449 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC3.3□□□□□ -1.88
Hmgb1P63158 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm22062-201ENSMUST00000082563 107 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Gm26126-201ENSMUST00000083188 164 ntBASIC3.3□□□□□ -1.88
Hmgb1P63158 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb1P63158 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm24338-201ENSMUST00000104205 127 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Snord98-201ENSMUST00000116819 65 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm22678-201ENSMUST00000116974 101 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb1P63158 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm24573-201ENSMUST00000175499 112 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21842-201ENSMUST00000177552 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21626-201ENSMUST00000177791 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21562-201ENSMUST00000177888 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21539-201ENSMUST00000177925 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm17522-201ENSMUST00000178144 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21599-201ENSMUST00000178249 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21914-201ENSMUST00000178452 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21723-201ENSMUST00000178692 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21916-201ENSMUST00000178771 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21801-201ENSMUST00000178865 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21633-201ENSMUST00000178941 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21821-201ENSMUST00000179646 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21588-201ENSMUST00000180074 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21780-201ENSMUST00000180128 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21572-201ENSMUST00000180134 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm21529-201ENSMUST00000180175 498 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm27700-201ENSMUST00000185003 81 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Mir7028-201ENSMUST00000185016 64 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm28591-201ENSMUST00000185259 183 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm29370-202ENSMUST00000187476 499 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm44337-201ENSMUST00000196553 114 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.29□□□□□ -1.88
Hmgb1P63158 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb1P63158 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.28□□□□□ -1.88
Hmgb1P63158 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb1P63158 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.28□□□□□ -1.88
Hmgb1P63158 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hmgb1P63158 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hmgb1P63158 Gm12458-201ENSMUST00000119387 495 ntBASIC3.28□□□□□ -1.88
Hmgb1P63158 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 190.1 ms