Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.14□□□□□ -1.75
Col18a1P39061 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.14□□□□□ -1.75
Col18a1P39061 AC167721.1-201ENSMUST00000217088 279 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col18a1P39061 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col18a1P39061 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col18a1P39061 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col18a1P39061 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col18a1P39061 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col18a1P39061 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col18a1P39061 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Gm26479-201ENSMUST00000122620 106 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.14□□□□□ -1.75
Col18a1P39061 Gm23642-201ENSMUST00000157858 258 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Gm22099-201ENSMUST00000157925 123 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Gm25486-201ENSMUST00000158726 63 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col18a1P39061 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Col18a1P39061 Gm29603-201ENSMUST00000186792 334 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Col18a1P39061 Gm34314-201ENSMUST00000203622 367 ntBASIC4.14□□□□□ -1.75
Col18a1P39061 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col18a1P39061 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col18a1P39061 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Col18a1P39061 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Col18a1P39061 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col18a1P39061 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col18a1P39061 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col18a1P39061 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Col18a1P39061 Gm23651-201ENSMUST00000116755 120 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Mir466i-201ENSMUST00000116924 121 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Gm25153-201ENSMUST00000157118 156 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Gm24006-201ENSMUST00000158462 132 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Gm22852-201ENSMUST00000177899 101 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Gm28900-201ENSMUST00000185232 156 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Gm5552-201ENSMUST00000197149 515 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col18a1P39061 Gm45006-201ENSMUST00000206078 690 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Gm10242-201ENSMUST00000090064 330 ntBASIC4.13□□□□□ -1.75
Col18a1P39061 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col18a1P39061 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Col18a1P39061 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col18a1P39061 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm24715-201ENSMUST00000102377 95 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Mir676-201ENSMUST00000102443 89 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm11572-201ENSMUST00000119164 120 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm13239-201ENSMUST00000119920 637 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm14649-201ENSMUST00000121814 324 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm11334-201ENSMUST00000121969 156 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm13901-201ENSMUST00000137252 468 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm22966-201ENSMUST00000157957 129 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Mir5127-201ENSMUST00000175295 71 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col18a1P39061 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Col18a1P39061 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col18a1P39061 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Col18a1P39061 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col18a1P39061 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Col18a1P39061 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col18a1P39061 Gm22071-201ENSMUST00000116857 83 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm12086-201ENSMUST00000120863 228 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm11849-201ENSMUST00000121293 261 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.12□□□□□ -1.75
Col18a1P39061 Gm22845-201ENSMUST00000157712 104 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm23182-201ENSMUST00000158688 135 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm21673-201ENSMUST00000186640 436 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm21135-201ENSMUST00000189023 436 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm37763-201ENSMUST00000193445 120 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.12□□□□□ -1.75
Col18a1P39061 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm8508-201ENSMUST00000061226 363 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 n-R5s176-201ENSMUST00000082683 109 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Gm23645-201ENSMUST00000083228 108 ntBASIC4.12□□□□□ -1.75
Col18a1P39061 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col18a1P39061 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Col18a1P39061 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.11□□□□□ -1.75
Col18a1P39061 Gm23000-201ENSMUST00000157083 139 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Mir3076-201ENSMUST00000175415 60 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm26501-201ENSMUST00000178307 107 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm8807-201ENSMUST00000179328 492 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm27672-201ENSMUST00000183751 204 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm43193-201ENSMUST00000197732 441 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm44520-201ENSMUST00000205447 802 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm44844-201ENSMUST00000207242 336 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm18453-201ENSMUST00000208000 626 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Gm26121-201ENSMUST00000083364 162 ntBASIC4.11□□□□□ -1.75
Col18a1P39061 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col18a1P39061 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 196.2 ms