Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
PrkdcP97313 Gm12825-201ENSMUST00000120249 563 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Gm25544-201ENSMUST00000122676 120 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Mir1949-201ENSMUST00000157434 141 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Gm22537-201ENSMUST00000158172 199 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
PrkdcP97313 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
PrkdcP97313 Gm12191-201ENSMUST00000118307 348 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm12639-201ENSMUST00000121400 493 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.18□□□□□ -2.38
PrkdcP97313 Trbv24-201ENSMUST00000194614 347 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm16428-201ENSMUST00000121193 723 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm22817-201ENSMUST00000157448 356 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm23181-201ENSMUST00000158685 110 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.18□□□□□ -2.38
PrkdcP97313 Gm16404-201ENSMUST00000177739 468 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm7958-201ENSMUST00000178255 468 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm7950-201ENSMUST00000179633 468 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm14598-201ENSMUST00000180109 468 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm14625-201ENSMUST00000180231 468 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
PrkdcP97313 Gm25589-201ENSMUST00000082502 166 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm23299-201ENSMUST00000082708 79 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
PrkdcP97313 Gm15029-201ENSMUST00000119742 199 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm6956-201ENSMUST00000134724 546 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm24911-201ENSMUST00000157292 136 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm8161-201ENSMUST00000168739 481 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm27517-201ENSMUST00000184347 236 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm44295-201ENSMUST00000203805 437 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
PrkdcP97313 Gm24144-201ENSMUST00000082632 111 ntBASIC0.18□□□□□ -2.38
PrkdcP97313 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm14669-201ENSMUST00000118841 250 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm16354-201ENSMUST00000155376 150 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm21815-201ENSMUST00000178213 664 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm28843-201ENSMUST00000189198 678 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm29546-201ENSMUST00000191171 678 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm29740-201ENSMUST00000193182 655 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm44465-201ENSMUST00000199536 114 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.17□□□□□ -2.38
PrkdcP97313 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
PrkdcP97313 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm24047-201ENSMUST00000102405 104 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm16186-201ENSMUST00000120132 216 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm23713-201ENSMUST00000157353 70 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm22615-201ENSMUST00000158102 70 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm45288-201ENSMUST00000210236 151 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm45374-201ENSMUST00000211388 136 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm25128-201ENSMUST00000083339 76 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm14731-201ENSMUST00000119216 376 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Gm23167-201ENSMUST00000157155 103 ntBASIC0.17□□□□□ -2.38
PrkdcP97313 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
PrkdcP97313 Gm18397-201ENSMUST00000176704 587 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm43708-201ENSMUST00000198857 961 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm46194-201ENSMUST00000218136 320 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm23907-201ENSMUST00000104595 189 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm11813-201ENSMUST00000118586 291 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm20409-201ENSMUST00000173457 130 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.16□□□□□ -2.38
PrkdcP97313 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm10264-201ENSMUST00000220589 429 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm25697-201ENSMUST00000082902 98 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm11845-201ENSMUST00000117886 327 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm25669-201ENSMUST00000157699 112 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm24020-201ENSMUST00000180156 108 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm29299-201ENSMUST00000185609 923 ntBASIC0.16□□□□□ -2.38
PrkdcP97313 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
PrkdcP97313 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 199 ms