Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
PrkdcP97313 Gm13440-201ENSMUST00000121665 496 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm25961-201ENSMUST00000157174 135 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm22646-201ENSMUST00000175130 115 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm24611-201ENSMUST00000083272 107 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm24126-201ENSMUST00000104111 106 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm14868-201ENSMUST00000117840 216 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm14907-201ENSMUST00000121948 854 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm14651-201ENSMUST00000147192 442 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC0.23□□□□□ -2.37
PrkdcP97313 Mir710-201ENSMUST00000102088 110 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Mir6402-201ENSMUST00000183406 80 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Gm18252-203ENSMUST00000215855 757 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.23□□□□□ -2.37
PrkdcP97313 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
PrkdcP97313 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
PrkdcP97313 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.22□□□□□ -2.37
PrkdcP97313 Mir6399-201ENSMUST00000184050 84 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm29641-201ENSMUST00000188955 259 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 AC115357.1-201ENSMUST00000227575 466 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm24805-201ENSMUST00000082931 104 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm23100-201ENSMUST00000083455 141 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm12636-201ENSMUST00000117395 624 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm12889-201ENSMUST00000118684 241 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm25936-201ENSMUST00000179952 114 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm29516-201ENSMUST00000190402 468 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm5309-201ENSMUST00000197416 677 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm24468-201ENSMUST00000104489 104 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
PrkdcP97313 Gm24221-201ENSMUST00000158833 313 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm37213-201ENSMUST00000193077 586 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm19540-201ENSMUST00000221843 810 ntBASIC0.22□□□□□ -2.37
PrkdcP97313 Gm24049-201ENSMUST00000102409 100 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm27313-201ENSMUST00000183500 142 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
PrkdcP97313 Gm23723-201ENSMUST00000082996 132 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 AA413626-201ENSMUST00000121125 494 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm25543-201ENSMUST00000122678 312 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm24915-201ENSMUST00000157288 78 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm42570-201ENSMUST00000195937 292 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.21□□□□□ -2.38
PrkdcP97313 AC115047.1-201ENSMUST00000213795 322 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 AC165437.1-201ENSMUST00000228640 536 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.21□□□□□ -2.38
PrkdcP97313 Gm24412-201ENSMUST00000083426 109 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
PrkdcP97313 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
PrkdcP97313 Gm18357-201ENSMUST00000188184 580 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm7897-201ENSMUST00000193981 554 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC0.21□□□□□ -2.38
PrkdcP97313 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
PrkdcP97313 Gm10038-201ENSMUST00000077233 441 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm25856-201ENSMUST00000082786 75 ntBASIC0.21□□□□□ -2.38
PrkdcP97313 Gm14748-201ENSMUST00000119819 411 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.2□□□□□ -2.38
PrkdcP97313 Gm17119-201ENSMUST00000163943 280 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
PrkdcP97313 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm23172-201ENSMUST00000157160 124 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm17100-201ENSMUST00000168963 272 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm37713-201ENSMUST00000191746 198 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
PrkdcP97313 Gm43493-201ENSMUST00000199837 202 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm44794-201ENSMUST00000206550 411 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm25788-201ENSMUST00000082721 131 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm26213-201ENSMUST00000158582 110 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm37399-201ENSMUST00000195224 416 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
PrkdcP97313 Mir216a-201ENSMUST00000083605 72 ntBASIC0.2□□□□□ -2.38
PrkdcP97313 Gm28344-201ENSMUST00000185704 279 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Gm4921-201ENSMUST00000219804 992 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
PrkdcP97313 Gm17085-201ENSMUST00000165425 502 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
PrkdcP97313 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Gm22522-201ENSMUST00000158271 151 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Gm16162-201ENSMUST00000162296 297 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 AC165284.1-201ENSMUST00000228614 458 ntBASIC0.19□□□□□ -2.38
PrkdcP97313 Gm24319-201ENSMUST00000083389 107 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 177.5 ms