Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col18a1P39061 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col18a1P39061 Gm25720-201ENSMUST00000157503 105 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.28□□□□□ -1.72
Col18a1P39061 Gm38088-201ENSMUST00000195829 241 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 AC168880.2-201ENSMUST00000224488 201 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Col18a1P39061 Gm25126-201ENSMUST00000083343 102 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col18a1P39061 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.28□□□□□ -1.72
Col18a1P39061 Gm45257-201ENSMUST00000210301 3998 ntBASIC4.28□□□□□ -1.72
Col18a1P39061 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col18a1P39061 Gm12509-201ENSMUST00000118033 609 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm11490-201ENSMUST00000118128 272 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm13876-201ENSMUST00000118451 261 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm26278-201ENSMUST00000157098 132 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.27□□□□□ -1.73
Col18a1P39061 Gm28453-203ENSMUST00000187041 189 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm38044-201ENSMUST00000192964 487 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm18433-202ENSMUST00000195682 196 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm43427-201ENSMUST00000198188 331 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Gm6842-201ENSMUST00000211361 390 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col18a1P39061 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col18a1P39061 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col18a1P39061 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col18a1P39061 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col18a1P39061 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col18a1P39061 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col18a1P39061 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col18a1P39061 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.27□□□□□ -1.73
Col18a1P39061 Mir6238-201ENSMUST00000184140 129 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col18a1P39061 Mir7682-201ENSMUST00000198467 58 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col18a1P39061 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col18a1P39061 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.27□□□□□ -1.73
Col18a1P39061 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col18a1P39061 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col18a1P39061 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col18a1P39061 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.26□□□□□ -1.73
Col18a1P39061 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col18a1P39061 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col18a1P39061 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col18a1P39061 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col18a1P39061 Gm6897-201ENSMUST00000117714 138 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm14758-201ENSMUST00000119104 138 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm15037-201ENSMUST00000120358 259 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm22027-201ENSMUST00000122737 127 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm25393-201ENSMUST00000157336 285 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm25664-201ENSMUST00000157697 107 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm23078-201ENSMUST00000157848 148 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm23644-201ENSMUST00000157856 77 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm24816-201ENSMUST00000175311 151 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm18953-201ENSMUST00000175694 300 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.26□□□□□ -1.73
Col18a1P39061 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.26□□□□□ -1.73
Col18a1P39061 Gm19123-201ENSMUST00000190716 651 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm37089-201ENSMUST00000195616 129 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm19620-201ENSMUST00000195972 434 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm6059-201ENSMUST00000196903 340 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm44473-201ENSMUST00000204039 152 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Gm24045-201ENSMUST00000083113 98 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Snora2b-201ENSMUST00000084005 137 ntBASIC4.26□□□□□ -1.73
Col18a1P39061 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col18a1P39061 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col18a1P39061 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col18a1P39061 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25089-201ENSMUST00000102015 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col18a1P39061 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm2830-201ENSMUST00000140330 385 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25840-201ENSMUST00000177821 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24952-201ENSMUST00000177909 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm23682-201ENSMUST00000178146 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24652-201ENSMUST00000178223 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm22629-201ENSMUST00000178272 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24021-201ENSMUST00000178435 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm22274-201ENSMUST00000178441 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm22050-201ENSMUST00000178442 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm23688-201ENSMUST00000178502 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm23944-201ENSMUST00000178607 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm26283-201ENSMUST00000178625 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25452-201ENSMUST00000178776 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24713-201ENSMUST00000178850 107 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm23286-201ENSMUST00000178963 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm22640-201ENSMUST00000179035 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25984-201ENSMUST00000179129 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25585-201ENSMUST00000179469 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24464-201ENSMUST00000179697 107 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm26374-201ENSMUST00000179737 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24040-201ENSMUST00000179786 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25017-201ENSMUST00000179805 79 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 175.6 ms