Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm35405-201ENSMUST00000218754 400 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Mir28a-201ENSMUST00000083560 86 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col18a1P39061 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col18a1P39061 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col18a1P39061 Gm26081-201ENSMUST00000104068 132 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm13396-201ENSMUST00000120617 271 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.32□□□□□ -1.72
Col18a1P39061 Gm23121-201ENSMUST00000157653 173 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm17052-201ENSMUST00000165496 289 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm4468-201ENSMUST00000170206 294 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Mir669k-201ENSMUST00000177742 127 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm25673-201ENSMUST00000179957 127 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm26585-201ENSMUST00000180890 630 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm29657-201ENSMUST00000189807 342 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm7182-201ENSMUST00000193351 732 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm36985-201ENSMUST00000195595 379 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm34091-201ENSMUST00000200875 604 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.32□□□□□ -1.72
Col18a1P39061 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col18a1P39061 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col18a1P39061 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col18a1P39061 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col18a1P39061 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col18a1P39061 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col18a1P39061 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col18a1P39061 Gm26423-201ENSMUST00000104277 128 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm25783-201ENSMUST00000122525 190 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm16327-201ENSMUST00000137146 228 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.31□□□□□ -1.72
Col18a1P39061 Gm23167-201ENSMUST00000157155 103 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm23759-201ENSMUST00000158351 268 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm16232-201ENSMUST00000162856 167 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col18a1P39061 Gm28399-201ENSMUST00000186221 318 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm28572-201ENSMUST00000187444 318 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm29365-201ENSMUST00000189461 699 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm34073-201ENSMUST00000195736 212 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm43717-201ENSMUST00000198684 310 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm25814-201ENSMUST00000082754 107 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Gm23454-201ENSMUST00000083332 133 ntBASIC4.31□□□□□ -1.72
Col18a1P39061 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col18a1P39061 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col18a1P39061 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col18a1P39061 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col18a1P39061 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col18a1P39061 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col18a1P39061 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.3□□□□□ -1.72
Col18a1P39061 Gm20651-201ENSMUST00000177219 329 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Gm29350-201ENSMUST00000189141 541 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.3□□□□□ -1.72
Col18a1P39061 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col18a1P39061 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col18a1P39061 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col18a1P39061 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.3□□□□□ -1.72
Col18a1P39061 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col18a1P39061 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Col18a1P39061 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col18a1P39061 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Col18a1P39061 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Col18a1P39061 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col18a1P39061 Gm22831-201ENSMUST00000102473 109 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Mir344c-201ENSMUST00000103919 92 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Gm14163-201ENSMUST00000117342 217 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Gm11935-201ENSMUST00000118608 399 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Gm26337-201ENSMUST00000178000 79 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Gm42828-201ENSMUST00000199669 469 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.3□□□□□ -1.72
Col18a1P39061 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.29□□□□□ -1.72
Col18a1P39061 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Col18a1P39061 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col18a1P39061 Gm22003-201ENSMUST00000101885 107 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm25280-201ENSMUST00000157269 101 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Mir3964-201ENSMUST00000174898 74 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm24100-201ENSMUST00000178592 79 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm7258-201ENSMUST00000179317 300 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm23963-201ENSMUST00000179603 77 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col18a1P39061 Gm24137-201ENSMUST00000180055 79 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm22756-201ENSMUST00000180118 107 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm22391-201ENSMUST00000180356 79 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm27476-201ENSMUST00000183366 104 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm5329-201ENSMUST00000186898 463 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm43521-201ENSMUST00000197838 255 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm43107-201ENSMUST00000198729 255 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm26379-202ENSMUST00000200225 132 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Snord82-201ENSMUST00000082889 70 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm26054-201ENSMUST00000083037 107 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm24492-201ENSMUST00000083798 107 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm10351-201ENSMUST00000087694 125 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Gm25207-201ENSMUST00000093745 107 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.29□□□□□ -1.72
Col18a1P39061 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col18a1P39061 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.29□□□□□ -1.72
Col18a1P39061 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col18a1P39061 Gm24423-201ENSMUST00000101982 106 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms