Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm7214-201ENSMUST00000222428 272 ntBASIC1.49□□□□□ -2.17
Trav6n-5A0A075B621 Gm5374-201ENSMUST00000222868 657 ntBASIC1.49□□□□□ -2.17
Trav6n-5A0A075B621 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.49□□□□□ -2.17
Trav6n-5A0A075B621 Gm23444-201ENSMUST00000082922 191 ntBASIC1.49□□□□□ -2.17
Trav6n-5A0A075B621 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trav6n-5A0A075B621 Gm22115-201ENSMUST00000103976 133 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm24430-201ENSMUST00000104077 104 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm23923-201ENSMUST00000104108 133 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm14013-201ENSMUST00000119006 270 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm15719-201ENSMUST00000120619 635 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm14765-201ENSMUST00000121954 326 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm23713-201ENSMUST00000157353 70 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm23668-201ENSMUST00000157465 111 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm24439-201ENSMUST00000157894 117 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm24958-201ENSMUST00000158009 97 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm22615-201ENSMUST00000158102 70 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm23568-201ENSMUST00000177960 92 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm24829-201ENSMUST00000179245 92 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm27028-201ENSMUST00000182303 399 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm9892-201ENSMUST00000182415 992 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm27979-201ENSMUST00000185126 56 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm21673-201ENSMUST00000186640 436 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm21135-201ENSMUST00000189023 436 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm43865-201ENSMUST00000204721 127 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm7039-201ENSMUST00000205138 346 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm45590-201ENSMUST00000209715 262 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm32300-201ENSMUST00000221735 515 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm7065-201ENSMUST00000222150 474 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm22508-201ENSMUST00000082772 110 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm24921-201ENSMUST00000083024 107 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.48□□□□□ -2.17
Trav6n-5A0A075B621 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm14007-201ENSMUST00000118288 210 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm14049-201ENSMUST00000121009 636 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm14709-201ENSMUST00000121225 304 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm13356-201ENSMUST00000121678 335 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm12872-201ENSMUST00000121835 320 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm23889-201ENSMUST00000122689 104 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm26027-201ENSMUST00000122725 268 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm22597-201ENSMUST00000157602 80 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm22386-201ENSMUST00000158192 129 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm22389-201ENSMUST00000158193 301 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm22159-201ENSMUST00000158412 130 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm17072-201ENSMUST00000166673 658 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Mir7021-201ENSMUST00000197026 63 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Igkv8-31-201ENSMUST00000200040 372 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm10297-201ENSMUST00000207136 651 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm26446-201ENSMUST00000082455 103 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Gm23517-201ENSMUST00000082830 192 ntBASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trav6n-5A0A075B621 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm26377-201ENSMUST00000102184 108 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm14973-201ENSMUST00000117248 255 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm14774-201ENSMUST00000117857 536 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm11849-201ENSMUST00000121293 261 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm22535-201ENSMUST00000158174 119 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm24768-201ENSMUST00000158512 94 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm25490-201ENSMUST00000158734 130 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm22527-201ENSMUST00000158816 106 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm2930-201ENSMUST00000170403 474 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm24572-201ENSMUST00000175505 88 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm11395-201ENSMUST00000181011 499 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm10193-201ENSMUST00000188288 231 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm42925-201ENSMUST00000197359 285 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm42672-201ENSMUST00000197821 352 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm44024-201ENSMUST00000203008 476 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm44182-201ENSMUST00000204052 115 ntBASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav6n-5A0A075B621 Gm9377-201ENSMUST00000207227 623 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms