Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim9Q8C7M3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim9Q8C7M3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim9Q8C7M3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm23152-201ENSMUST00000175322 116 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm43286-201ENSMUST00000197420 424 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm42672-201ENSMUST00000197821 352 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm43284-201ENSMUST00000200103 253 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm45101-201ENSMUST00000208327 232 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm46389-201ENSMUST00000223199 392 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm23932-201ENSMUST00000082914 107 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Snora70-201ENSMUST00000083047 137 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm22974-201ENSMUST00000083301 103 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim9Q8C7M3 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Mir701-201ENSMUST00000102208 109 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm13153-201ENSMUST00000120969 637 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm14775-201ENSMUST00000122089 310 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm13901-201ENSMUST00000137252 468 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm18956-201ENSMUST00000192857 480 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm44076-201ENSMUST00000203072 520 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm44208-201ENSMUST00000205199 421 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm45005-201ENSMUST00000206640 157 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm45207-201ENSMUST00000207469 145 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm45420-201ENSMUST00000211243 425 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm20734-201ENSMUST00000216939 193 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Snora23-201ENSMUST00000082517 184 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim9Q8C7M3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm23988-201ENSMUST00000117034 122 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm12191-201ENSMUST00000118307 348 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm9703-201ENSMUST00000119573 343 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm12785-201ENSMUST00000122052 172 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm26149-201ENSMUST00000157432 108 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm17162-201ENSMUST00000168538 473 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm26195-201ENSMUST00000175035 101 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm28288-201ENSMUST00000191019 214 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm28314-201ENSMUST00000191276 345 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm37104-201ENSMUST00000193278 196 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm44084-201ENSMUST00000203947 409 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm18540-201ENSMUST00000204025 526 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm44446-201ENSMUST00000204864 255 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm23650-201ENSMUST00000083355 70 ntBASIC3.54□□□□□ -1.84
Trim9Q8C7M3 Gm10343-201ENSMUST00000096279 348 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 213.4 ms