Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col18a1P39061 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm24263-201ENSMUST00000104059 107 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm25377-201ENSMUST00000104334 129 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm14518-201ENSMUST00000117351 542 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm13167-201ENSMUST00000118554 578 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm12617-201ENSMUST00000121268 381 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm25270-201ENSMUST00000122606 138 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm23120-201ENSMUST00000157654 287 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm22989-201ENSMUST00000158313 86 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm28288-201ENSMUST00000191019 214 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col18a1P39061 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col18a1P39061 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.35□□□□□ -1.71
Col18a1P39061 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm25875-201ENSMUST00000104323 107 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm27723-201ENSMUST00000157398 63 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm24264-201ENSMUST00000179835 94 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Mir7009-201ENSMUST00000184519 64 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm28344-201ENSMUST00000185704 279 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm28967-201ENSMUST00000187351 281 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm44470-201ENSMUST00000203913 142 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm18188-201ENSMUST00000219386 478 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm23939-201ENSMUST00000082880 133 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Gm23239-201ENSMUST00000083006 181 ntBASIC4.35□□□□□ -1.71
Col18a1P39061 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col18a1P39061 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col18a1P39061 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Col18a1P39061 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col18a1P39061 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col18a1P39061 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col18a1P39061 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col18a1P39061 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col18a1P39061 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col18a1P39061 Gm14669-201ENSMUST00000118841 250 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col18a1P39061 Gm22646-201ENSMUST00000175130 115 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 Gm26622-201ENSMUST00000180520 298 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 Gm46138-201ENSMUST00000215294 426 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.34□□□□□ -1.71
Col18a1P39061 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.34□□□□□ -1.71
Col18a1P39061 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col18a1P39061 Gm22970-201ENSMUST00000083304 186 ntBASIC4.34□□□□□ -1.71
Col18a1P39061 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.34□□□□□ -1.72
Col18a1P39061 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.34□□□□□ -1.72
Col18a1P39061 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col18a1P39061 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col18a1P39061 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm23142-201ENSMUST00000101848 105 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm26240-201ENSMUST00000101893 105 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col18a1P39061 Gm13511-201ENSMUST00000121167 363 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.33□□□□□ -1.72
Col18a1P39061 Gm23231-201ENSMUST00000157299 104 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm28020-201ENSMUST00000157739 67 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Snord92-201ENSMUST00000175548 85 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm24862-201ENSMUST00000179103 79 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm23310-201ENSMUST00000179105 79 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm25461-201ENSMUST00000179293 79 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.33□□□□□ -1.72
Col18a1P39061 Gm45146-201ENSMUST00000207108 221 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Gm23264-201ENSMUST00000083372 107 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
Col18a1P39061 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col18a1P39061 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.33□□□□□ -1.72
Col18a1P39061 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col18a1P39061 Gm22033-201ENSMUST00000116947 90 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm12985-201ENSMUST00000118376 183 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm14566-201ENSMUST00000118915 321 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm24720-201ENSMUST00000157518 166 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm25175-201ENSMUST00000178712 79 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm23922-201ENSMUST00000178792 79 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm24657-201ENSMUST00000180085 79 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm22996-201ENSMUST00000180236 79 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm24949-201ENSMUST00000183609 215 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm28339-201ENSMUST00000185845 696 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm28849-201ENSMUST00000188127 174 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm28330-201ENSMUST00000190353 171 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.32□□□□□ -1.72
Col18a1P39061 Mir142-201ENSMUST00000198092 64 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm6112-201ENSMUST00000208037 629 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.32□□□□□ -1.72
Col18a1P39061 AC150901.1-201ENSMUST00000208407 145 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm45296-201ENSMUST00000209625 205 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm45252-201ENSMUST00000211579 397 ntBASIC4.32□□□□□ -1.72
Col18a1P39061 Gm6796-201ENSMUST00000211919 243 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 257.2 ms