Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco4Q9JIS3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco4Q9JIS3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco4Q9JIS3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco4Q9JIS3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco4Q9JIS3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Idnk-204ENSMUST00000226010 1898 ntBASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco4Q9JIS3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms