Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3383J3QQ59 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3383J3QQ59 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.43■□□□□ 0.54
Gm3383J3QQ59 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.43■□□□□ 0.54
Gm3383J3QQ59 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Gm13186-201ENSMUST00000118031 316 ntBASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Gm12895-201ENSMUST00000122214 226 ntBASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Gm27000-201ENSMUST00000182943 842 ntBASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Gm43514-201ENSMUST00000198852 424 ntBASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm3383J3QQ59 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Mir8098-201ENSMUST00000184011 137 ntBASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3383J3QQ59 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Gm6443-201ENSMUST00000203599 874 ntBASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3383J3QQ59 Fst-202ENSMUST00000223640 2612 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms