Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm14940-201ENSMUST00000119309 495 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm14765-201ENSMUST00000121954 326 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm22598-201ENSMUST00000157600 127 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm24439-201ENSMUST00000157894 117 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm2962-201ENSMUST00000159266 336 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col18a1P39061 Gm27465-201ENSMUST00000184290 91 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm5368-201ENSMUST00000189012 589 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.4□□□□□ -1.71
Col18a1P39061 Gm36189-201ENSMUST00000204113 523 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col18a1P39061 Gm25008-201ENSMUST00000083809 81 ntBASIC4.4□□□□□ -1.71
Col18a1P39061 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Col18a1P39061 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col18a1P39061 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col18a1P39061 Gm12785-201ENSMUST00000122052 172 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Gm14947-201ENSMUST00000133704 303 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Gm23044-201ENSMUST00000157891 100 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Gm25866-201ENSMUST00000158245 112 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Gm43402-201ENSMUST00000197159 159 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Gm19126-201ENSMUST00000207896 509 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Gm5955-201ENSMUST00000222712 219 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 AC159188.1-201ENSMUST00000225198 526 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col18a1P39061 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.39□□□□□ -1.71
Col18a1P39061 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col18a1P39061 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col18a1P39061 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col18a1P39061 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col18a1P39061 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col18a1P39061 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Gm13406-201ENSMUST00000121991 256 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Gm24409-201ENSMUST00000157881 152 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Gm22891-201ENSMUST00000158641 164 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Gm27545-201ENSMUST00000184755 202 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Gm33654-201ENSMUST00000221704 215 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.38□□□□□ -1.71
Col18a1P39061 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col18a1P39061 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col18a1P39061 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.38□□□□□ -1.71
Col18a1P39061 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col18a1P39061 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.38□□□□□ -1.71
Col18a1P39061 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC4.38□□□□□ -1.71
Col18a1P39061 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col18a1P39061 Gm16100-201ENSMUST00000120489 231 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm25654-201ENSMUST00000158467 88 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm21893-201ENSMUST00000179119 397 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col18a1P39061 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm23302-201ENSMUST00000082710 100 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm26263-201ENSMUST00000083281 164 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm23848-201ENSMUST00000083826 106 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col18a1P39061 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Col18a1P39061 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Col18a1P39061 Gm15162-201ENSMUST00000119325 283 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm14877-201ENSMUST00000119803 478 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm14846-201ENSMUST00000121868 216 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm12226-201ENSMUST00000144172 876 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm25834-201ENSMUST00000158916 101 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm25412-201ENSMUST00000180258 107 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Gm21960-201ENSMUST00000181924 452 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Col18a1P39061 Gm29668-201ENSMUST00000187802 315 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 Gm650-201ENSMUST00000144428 1551 ntBASIC4.37□□□□□ -1.71
Col18a1P39061 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col18a1P39061 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Col18a1P39061 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col18a1P39061 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC4.36□□□□□ -1.71
Col18a1P39061 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Col18a1P39061 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col18a1P39061 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col18a1P39061 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.36□□□□□ -1.71
Col18a1P39061 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col18a1P39061 Gm26061-201ENSMUST00000175584 108 ntBASIC4.36□□□□□ -1.71
Col18a1P39061 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.36□□□□□ -1.71
Col18a1P39061 Gm19366-201ENSMUST00000206996 156 ntBASIC4.36□□□□□ -1.71
Col18a1P39061 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.36□□□□□ -1.71
Col18a1P39061 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.36□□□□□ -1.71
Col18a1P39061 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col18a1P39061 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col18a1P39061 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms