Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25935-201ENSMUST00000178746 107 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.44□□□□□ -1.7
Col18a1P39061 Gm37128-201ENSMUST00000192599 232 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm38060-201ENSMUST00000194822 464 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col18a1P39061 Gm25801-201ENSMUST00000082638 106 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col18a1P39061 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col18a1P39061 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col18a1P39061 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Col18a1P39061 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Col18a1P39061 Mir541-201ENSMUST00000102097 90 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Mir208b-201ENSMUST00000104735 77 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Snord98-201ENSMUST00000116819 65 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Gm12956-201ENSMUST00000122184 414 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Gm25967-201ENSMUST00000157168 147 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Gm22849-201ENSMUST00000157713 307 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Gm24577-201ENSMUST00000158580 63 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Gm8580-201ENSMUST00000160295 464 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Mir6401-201ENSMUST00000184499 109 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col18a1P39061 Gm43991-201ENSMUST00000203751 274 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col18a1P39061 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.43□□□□□ -1.7
Col18a1P39061 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col18a1P39061 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col18a1P39061 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col18a1P39061 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col18a1P39061 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col18a1P39061 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col18a1P39061 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col18a1P39061 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col18a1P39061 Gm23990-201ENSMUST00000117031 117 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm14971-201ENSMUST00000117980 663 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm8114-201ENSMUST00000172225 484 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm24561-201ENSMUST00000175182 95 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm22290-201ENSMUST00000177655 107 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm22583-201ENSMUST00000178031 107 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col18a1P39061 Gm22633-201ENSMUST00000179834 107 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm42526-201ENSMUST00000198956 393 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm5899-201ENSMUST00000071770 270 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 n-R5s40-201ENSMUST00000082475 124 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col18a1P39061 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col18a1P39061 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col18a1P39061 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col18a1P39061 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col18a1P39061 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col18a1P39061 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col18a1P39061 Gm12417-201ENSMUST00000119153 403 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm26291-201ENSMUST00000158889 137 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col18a1P39061 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.42□□□□□ -1.7
Col18a1P39061 Gm25930-201ENSMUST00000082785 107 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Mir496a-201ENSMUST00000093627 79 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.42□□□□□ -1.7
Col18a1P39061 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Col18a1P39061 Gm26342-201ENSMUST00000104557 129 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Cox20-ps-201ENSMUST00000119872 353 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm22026-201ENSMUST00000122735 281 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.41□□□□□ -1.7
Col18a1P39061 Gm24240-201ENSMUST00000157785 135 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm25599-201ENSMUST00000157816 103 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm22114-201ENSMUST00000177756 107 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm22307-201ENSMUST00000180019 107 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm11395-201ENSMUST00000181011 499 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Gm27421-201ENSMUST00000184729 167 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.41□□□□□ -1.7
Col18a1P39061 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col18a1P39061 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col18a1P39061 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col18a1P39061 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col18a1P39061 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col18a1P39061 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col18a1P39061 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col18a1P39061 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col18a1P39061 Gm14823-201ENSMUST00000117698 238 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm14298-201ENSMUST00000139032 237 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm26279-201ENSMUST00000157095 102 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm25914-201ENSMUST00000157618 153 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm22435-201ENSMUST00000158552 128 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm8161-201ENSMUST00000168739 481 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm27410-201ENSMUST00000183851 115 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm1833-201ENSMUST00000191608 682 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm43975-201ENSMUST00000203023 481 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 AC168266.1-201ENSMUST00000216024 226 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 CT030645.1-201ENSMUST00000224020 231 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm4945-201ENSMUST00000075152 453 ntBASIC4.4□□□□□ -1.7
Col18a1P39061 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col18a1P39061 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Col18a1P39061 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Col18a1P39061 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 171.9 ms