Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm26363-201ENSMUST00000158866 83 ntBASIC0.59□□□□□ -2.31
PrkdcP97313 Gm18416-201ENSMUST00000175635 1003 ntBASIC0.59□□□□□ -2.31
PrkdcP97313 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC0.59□□□□□ -2.31
PrkdcP97313 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.59□□□□□ -2.31
PrkdcP97313 n-R5s197-201ENSMUST00000083302 119 ntBASIC0.59□□□□□ -2.31
PrkdcP97313 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.32
PrkdcP97313 n-R5s26-201ENSMUST00000104601 122 ntBASIC0.59□□□□□ -2.32
PrkdcP97313 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.59□□□□□ -2.32
PrkdcP97313 Gm22447-201ENSMUST00000158155 92 ntBASIC0.59□□□□□ -2.32
PrkdcP97313 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.59□□□□□ -2.32
PrkdcP97313 Gm45313-201ENSMUST00000210584 178 ntBASIC0.59□□□□□ -2.32
PrkdcP97313 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
PrkdcP97313 Gm12238-201ENSMUST00000127764 124 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PrkdcP97313 Gm43316-201ENSMUST00000197252 1295 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Gm7407-201ENSMUST00000208301 568 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
PrkdcP97313 Mir223-201ENSMUST00000102112 110 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Gm24793-201ENSMUST00000104289 132 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Gm14786-201ENSMUST00000117127 944 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Gm9318-201ENSMUST00000222444 438 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
PrkdcP97313 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
PrkdcP97313 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
PrkdcP97313 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.58□□□□□ -2.32
PrkdcP97313 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC0.58□□□□□ -2.32
PrkdcP97313 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PrkdcP97313 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC0.58□□□□□ -2.32
PrkdcP97313 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
PrkdcP97313 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
PrkdcP97313 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
PrkdcP97313 Gm22862-201ENSMUST00000178593 121 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
PrkdcP97313 Gm18488-201ENSMUST00000215082 364 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
PrkdcP97313 Gm13246-201ENSMUST00000120994 315 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm16490-201ENSMUST00000165299 351 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm45791-201ENSMUST00000212908 352 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
PrkdcP97313 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 AC124524.1-201ENSMUST00000225833 181 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 AC115047.2-201ENSMUST00000214421 1848 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
PrkdcP97313 Gm26285-201ENSMUST00000177923 107 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm25198-201ENSMUST00000178574 110 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm45365-201ENSMUST00000209489 256 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm23622-201ENSMUST00000082460 107 ntBASIC0.57□□□□□ -2.32
PrkdcP97313 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
PrkdcP97313 Gm14833-201ENSMUST00000118345 1027 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm24878-201ENSMUST00000158782 104 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm17538-201ENSMUST00000168236 327 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm15281-201ENSMUST00000125181 351 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm15275-201ENSMUST00000154752 347 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Mir6904-201ENSMUST00000183443 67 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC0.56□□□□□ -2.32
PrkdcP97313 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 AC121942.2-201ENSMUST00000223824 600 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PrkdcP97313 Gm37523-201ENSMUST00000194901 412 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Mir6896-201ENSMUST00000198033 73 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC0.56□□□□□ -2.32
PrkdcP97313 AC149294.9-201ENSMUST00000227256 164 ntBASIC0.56□□□□□ -2.32
PrkdcP97313 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
PrkdcP97313 Gm21990-201ENSMUST00000124692 383 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm22074-201ENSMUST00000158595 113 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm22923-201ENSMUST00000174952 110 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Mir6915-201ENSMUST00000198839 69 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC0.55□□□□□ -2.32
PrkdcP97313 Gm25321-201ENSMUST00000122558 102 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm23469-201ENSMUST00000157131 104 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm25341-201ENSMUST00000157461 268 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.55□□□□□ -2.32
PrkdcP97313 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
PrkdcP97313 Gm14253-201ENSMUST00000122112 639 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm25520-201ENSMUST00000158389 118 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Mir466m-201ENSMUST00000175052 84 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm25994-201ENSMUST00000175392 101 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
PrkdcP97313 Gm22507-201ENSMUST00000082773 160 ntBASIC0.55□□□□□ -2.32
PrkdcP97313 Gm22254-201ENSMUST00000179186 110 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 AC105169.1-201ENSMUST00000218912 1294 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC0.54□□□□□ -2.32
PrkdcP97313 Gm22302-201ENSMUST00000082657 106 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
PrkdcP97313 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
PrkdcP97313 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
PrkdcP97313 Gm9440-201ENSMUST00000119667 539 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 Gm25606-201ENSMUST00000158363 95 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PrkdcP97313 Gm21885-201ENSMUST00000178891 327 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 Gm27028-201ENSMUST00000182303 399 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC0.54□□□□□ -2.32
PrkdcP97313 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PrkdcP97313 Gm2830-201ENSMUST00000140330 385 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.54□□□□□ -2.32
PrkdcP97313 AC154271.1-201ENSMUST00000224780 383 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms