Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm24122-201ENSMUST00000104107 132 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm14810-201ENSMUST00000121628 486 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm5263-201ENSMUST00000163646 601 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Mir3066-201ENSMUST00000175296 83 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm24518-201ENSMUST00000180275 94 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm27490-201ENSMUST00000184754 128 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 Gm43601-201ENSMUST00000196294 945 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm45119-201ENSMUST00000207612 199 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 AC174457.1-201ENSMUST00000215932 226 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm26204-201ENSMUST00000082906 107 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm23721-201ENSMUST00000083005 107 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm26497-201ENSMUST00000083146 107 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col18a1P39061 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col18a1P39061 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm15697-201ENSMUST00000121946 2902 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col18a1P39061 Gm25485-201ENSMUST00000104120 132 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm13967-201ENSMUST00000120404 380 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm7327-201ENSMUST00000120925 652 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm8244-201ENSMUST00000121254 264 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm22814-201ENSMUST00000157452 104 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm26348-201ENSMUST00000157528 240 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm23592-201ENSMUST00000157859 117 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Mir3058-201ENSMUST00000175126 91 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm25235-201ENSMUST00000179933 107 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.47□□□□□ -1.69
Col18a1P39061 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col18a1P39061 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Col18a1P39061 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Col18a1P39061 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col18a1P39061 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Gm5123-201ENSMUST00000121905 837 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Gm5755-201ENSMUST00000152394 837 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Gm19193-201ENSMUST00000190263 590 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.46□□□□□ -1.7
Col18a1P39061 Gm18441-201ENSMUST00000223539 617 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.46□□□□□ -1.7
Col18a1P39061 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col18a1P39061 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Col18a1P39061 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col18a1P39061 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col18a1P39061 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm25538-201ENSMUST00000101943 107 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm12647-201ENSMUST00000118977 265 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm25666-201ENSMUST00000157702 107 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm17065-201ENSMUST00000165245 239 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col18a1P39061 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col18a1P39061 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm15002-201ENSMUST00000118406 452 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm15493-201ENSMUST00000119461 528 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm11456-201ENSMUST00000121070 256 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm24358-201ENSMUST00000158424 288 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm10075-201ENSMUST00000162030 545 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.45□□□□□ -1.7
Col18a1P39061 Mir5118-201ENSMUST00000175551 67 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm2092-201ENSMUST00000178887 639 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm2759-201ENSMUST00000179938 639 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Mir6336-201ENSMUST00000183581 130 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.45□□□□□ -1.7
Col18a1P39061 Gm45200-201ENSMUST00000207434 919 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.45□□□□□ -1.7
Col18a1P39061 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.45□□□□□ -1.7
Col18a1P39061 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col18a1P39061 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col18a1P39061 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col18a1P39061 Gm11923-201ENSMUST00000118135 508 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm13581-201ENSMUST00000120675 278 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm14768-201ENSMUST00000122126 678 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Mir1903-201ENSMUST00000122574 80 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.44□□□□□ -1.7
Col18a1P39061 Gm22145-201ENSMUST00000157396 148 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm24691-201ENSMUST00000157762 140 ntBASIC4.44□□□□□ -1.7
Col18a1P39061 Gm26028-201ENSMUST00000158660 294 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 162.8 ms