Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm13901-201ENSMUST00000137252 468 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm27723-201ENSMUST00000157398 63 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm24876-201ENSMUST00000158780 92 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm17072-201ENSMUST00000166673 658 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm22367-201ENSMUST00000178930 132 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Mir6336-201ENSMUST00000183581 130 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm28155-201ENSMUST00000191066 151 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm36259-201ENSMUST00000197340 392 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm18453-201ENSMUST00000208000 626 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm20039-201ENSMUST00000210329 394 ntBASIC4.05□□□□□ -1.76
RpainQ9CWY9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RpainQ9CWY9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RpainQ9CWY9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RpainQ9CWY9 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm12568-201ENSMUST00000117362 624 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm14119-201ENSMUST00000119511 235 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RpainQ9CWY9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm27926-201ENSMUST00000157180 66 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm23312-201ENSMUST00000158774 102 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Mir6345-201ENSMUST00000184286 128 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm28534-201ENSMUST00000187744 676 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm7182-201ENSMUST00000193351 732 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm43814-201ENSMUST00000197851 413 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm8820-201ENSMUST00000204077 571 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RpainQ9CWY9 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.04□□□□□ -1.76
RpainQ9CWY9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RpainQ9CWY9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm11600-201ENSMUST00000119592 240 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm24537-201ENSMUST00000157950 102 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm22389-201ENSMUST00000158193 301 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm24085-201ENSMUST00000175172 116 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Mir5710-201ENSMUST00000176884 69 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm27760-201ENSMUST00000185048 114 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm7468-201ENSMUST00000203900 652 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Gm45403-201ENSMUST00000209453 276 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.03□□□□□ -1.76
RpainQ9CWY9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RpainQ9CWY9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm26147-201ENSMUST00000104479 114 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm14940-201ENSMUST00000119309 495 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm12721-201ENSMUST00000120621 268 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm13903-201ENSMUST00000120945 193 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm14473-201ENSMUST00000122269 557 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Trav20-201ENSMUST00000142754 347 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm25224-201ENSMUST00000158195 68 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm24666-201ENSMUST00000158937 167 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm17119-201ENSMUST00000163943 280 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm16490-201ENSMUST00000165299 351 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Mir6346-201ENSMUST00000183982 81 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RpainQ9CWY9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm37300-201ENSMUST00000193327 280 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm34073-201ENSMUST00000195736 212 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm44977-201ENSMUST00000205283 420 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm45772-201ENSMUST00000212961 240 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm19790-201ENSMUST00000214414 251 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Gm26055-201ENSMUST00000083038 107 ntBASIC4.02□□□□□ -1.77
RpainQ9CWY9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RpainQ9CWY9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms