Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm23000-201ENSMUST00000157083 139 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm22036-201ENSMUST00000157279 215 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm24847-201ENSMUST00000158032 108 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm24553-201ENSMUST00000158653 131 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Mir6338-201ENSMUST00000183389 109 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Mir6383-201ENSMUST00000184545 116 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm44063-201ENSMUST00000203307 376 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm44824-201ENSMUST00000207021 229 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Gm44858-201ENSMUST00000207360 154 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf1Q8CFK2 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm22488-201ENSMUST00000116811 127 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm13761-201ENSMUST00000117238 807 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm26020-201ENSMUST00000122729 183 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm24914-201ENSMUST00000157285 313 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm25360-201ENSMUST00000178786 191 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm24264-201ENSMUST00000179835 94 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Mir6408-201ENSMUST00000183643 91 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm44703-201ENSMUST00000205724 248 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm33654-201ENSMUST00000221704 215 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm21937-201ENSMUST00000222825 218 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 AC154390.1-201ENSMUST00000225629 277 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Brf1Q8CFK2 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm15799-201ENSMUST00000120899 289 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm12693-201ENSMUST00000121965 483 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm24385-201ENSMUST00000122694 350 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm8121-201ENSMUST00000153583 499 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm26100-201ENSMUST00000157245 127 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm22098-201ENSMUST00000157930 85 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm24191-201ENSMUST00000157977 122 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm7953-201ENSMUST00000168278 469 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm27999-201ENSMUST00000183539 193 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm27624-201ENSMUST00000185047 177 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm38332-201ENSMUST00000194189 147 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm37029-201ENSMUST00000195773 239 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm43393-201ENSMUST00000200147 194 ntBASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Brf1Q8CFK2 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm26423-201ENSMUST00000104277 128 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm14825-201ENSMUST00000113538 701 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm11577-201ENSMUST00000118030 737 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm7327-201ENSMUST00000120925 652 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm6762-201ENSMUST00000121769 289 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm14564-201ENSMUST00000122159 294 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm15914-201ENSMUST00000161922 309 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm28717-201ENSMUST00000189950 315 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm36964-201ENSMUST00000191876 198 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm38356-201ENSMUST00000194313 408 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.93□□□□□ -1.78
Brf1Q8CFK2 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm23136-201ENSMUST00000083425 99 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm25207-201ENSMUST00000093745 107 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.93□□□□□ -1.78
Brf1Q8CFK2 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 267.4 ms