Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22141-201ENSMUST00000157403 277 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm23671-201ENSMUST00000157472 103 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Mir3470b-201ENSMUST00000175563 126 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm37338-201ENSMUST00000191986 127 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm8242-202ENSMUST00000193056 475 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm44076-201ENSMUST00000203072 520 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.51□□□□□ -1.69
Col18a1P39061 Gm44977-201ENSMUST00000205283 420 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm24622-201ENSMUST00000082619 162 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm25792-201ENSMUST00000083289 100 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col18a1P39061 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col18a1P39061 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col18a1P39061 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col18a1P39061 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col18a1P39061 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col18a1P39061 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col18a1P39061 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.51□□□□□ -1.69
Col18a1P39061 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col18a1P39061 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col18a1P39061 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col18a1P39061 Gm13729-201ENSMUST00000120328 406 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm11582-201ENSMUST00000121041 236 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm24501-201ENSMUST00000158452 62 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm24005-201ENSMUST00000158459 296 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm6374-201ENSMUST00000159051 788 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Mir3965-201ENSMUST00000175570 69 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm28785-201ENSMUST00000187478 379 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col18a1P39061 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col18a1P39061 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col18a1P39061 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 Gm15951-201ENSMUST00000118377 400 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.5□□□□□ -1.69
Col18a1P39061 Gm4222-201ENSMUST00000165784 470 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm17153-201ENSMUST00000171314 490 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm20415-201ENSMUST00000172877 423 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm25956-201ENSMUST00000175115 217 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col18a1P39061 Gm26297-201ENSMUST00000179464 132 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm27997-201ENSMUST00000184942 69 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm29140-201ENSMUST00000190187 476 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Trbv7-201ENSMUST00000193339 402 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm43655-201ENSMUST00000197367 222 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 Gm5002-201ENSMUST00000207145 223 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm29884-201ENSMUST00000218403 453 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.5□□□□□ -1.69
Col18a1P39061 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col18a1P39061 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Col18a1P39061 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col18a1P39061 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col18a1P39061 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col18a1P39061 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.49□□□□□ -1.69
Col18a1P39061 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col18a1P39061 Gm23744-201ENSMUST00000104231 149 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Gm22187-201ENSMUST00000157819 129 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Mir6382-201ENSMUST00000184055 110 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Gm27505-201ENSMUST00000185071 110 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Gm18341-201ENSMUST00000197538 622 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.49□□□□□ -1.69
Col18a1P39061 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col18a1P39061 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col18a1P39061 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.49□□□□□ -1.69
Col18a1P39061 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col18a1P39061 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.49□□□□□ -1.69
Col18a1P39061 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col18a1P39061 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Col18a1P39061 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col18a1P39061 Gm14816-201ENSMUST00000117174 294 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm26477-201ENSMUST00000122617 323 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm22859-201ENSMUST00000174978 122 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm24304-201ENSMUST00000177635 107 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm25156-201ENSMUST00000179809 79 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 Gm9068-201ENSMUST00000217393 455 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col18a1P39061 Gm25078-201ENSMUST00000082530 107 ntBASIC4.48□□□□□ -1.69
Col18a1P39061 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col18a1P39061 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col18a1P39061 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col18a1P39061 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col18a1P39061 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms