Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm13210-201ENSMUST00000121483 273 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC0.68□□□□□ -2.3
PrkdcP97313 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PrkdcP97313 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PrkdcP97313 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC0.68□□□□□ -2.3
PrkdcP97313 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PrkdcP97313 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PrkdcP97313 Gm6590-201ENSMUST00000203343 687 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 Gm5317-201ENSMUST00000204445 847 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.68□□□□□ -2.3
PrkdcP97313 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PrkdcP97313 Gm18296-201ENSMUST00000192475 783 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PrkdcP97313 Gm45192-201ENSMUST00000206749 283 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC0.68□□□□□ -2.3
PrkdcP97313 AC158395.1-201ENSMUST00000227206 452 ntBASIC0.68□□□□□ -2.3
PrkdcP97313 Gm26154-201ENSMUST00000102339 96 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Gm14039-201ENSMUST00000118705 101 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Gm14709-201ENSMUST00000121225 304 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC0.67□□□□□ -2.3
PrkdcP97313 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC0.67□□□□□ -2.3
PrkdcP97313 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC0.67□□□□□ -2.3
PrkdcP97313 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Gm14835-201ENSMUST00000119039 315 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Gm3851-201ENSMUST00000168653 318 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 AC079644.1-201ENSMUST00000220586 405 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
PrkdcP97313 Gm42671-201ENSMUST00000198013 1604 ntBASIC0.67□□□□□ -2.3
PrkdcP97313 Gm9071-201ENSMUST00000165915 474 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.66□□□□□ -2.3
PrkdcP97313 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PrkdcP97313 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC0.66□□□□□ -2.3
PrkdcP97313 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC0.66□□□□□ -2.3
PrkdcP97313 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm14558-201ENSMUST00000117458 381 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm22036-201ENSMUST00000157279 215 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm27419-201ENSMUST00000184576 109 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm29288-201ENSMUST00000191582 901 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PrkdcP97313 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm8676-201ENSMUST00000184206 637 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm37997-201ENSMUST00000193515 267 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.66□□□□□ -2.3
PrkdcP97313 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC0.66□□□□□ -2.3
PrkdcP97313 Gm15095-201ENSMUST00000118996 1430 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm12327-201ENSMUST00000121729 1168 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm28437-201ENSMUST00000190277 783 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Gm45754-201ENSMUST00000212380 279 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.66□□□□□ -2.3
PrkdcP97313 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
PrkdcP97313 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
PrkdcP97313 Gm15001-201ENSMUST00000117657 795 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm25625-201ENSMUST00000157221 96 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm27607-201ENSMUST00000185162 122 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm19244-201ENSMUST00000204340 253 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 AC130222.1-201ENSMUST00000221198 256 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm14678-201ENSMUST00000121396 482 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
PrkdcP97313 Mir3109-201ENSMUST00000175301 88 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
PrkdcP97313 Gm3724-201ENSMUST00000197957 349 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 CT010480.5-201ENSMUST00000225026 217 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm42942-201ENSMUST00000196086 1328 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm14537-201ENSMUST00000117464 599 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm22026-201ENSMUST00000122735 281 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm43371-201ENSMUST00000202838 1031 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm44818-201ENSMUST00000206608 358 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm9373-201ENSMUST00000208724 599 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Gm23040-201ENSMUST00000083869 163 ntBASIC0.65□□□□□ -2.31
PrkdcP97313 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PrkdcP97313 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC0.64□□□□□ -2.31
PrkdcP97313 Gm27265-201ENSMUST00000183559 77 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm27233-201ENSMUST00000184030 307 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm43991-201ENSMUST00000203751 274 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.64□□□□□ -2.31
PrkdcP97313 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Gm14894-201ENSMUST00000117170 270 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm26435-201ENSMUST00000179026 107 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm27025-201ENSMUST00000182392 942 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Gm37449-201ENSMUST00000193016 270 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC0.64□□□□□ -2.31
PrkdcP97313 Gm18658-201ENSMUST00000195558 270 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm45116-201ENSMUST00000207392 275 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 Gm45696-201ENSMUST00000212088 985 ntBASIC0.64□□□□□ -2.31
PrkdcP97313 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 158.1 ms