Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm10088-201ENSMUST00000074116 423 ntBASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Gm26446-201ENSMUST00000082455 103 ntBASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Gm25581-201ENSMUST00000083410 164 ntBASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Gm23875-201ENSMUST00000083711 318 ntBASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Rnft1Q9DCN7 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Rnft1Q9DCN7 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
Rnft1Q9DCN7 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Rnft1Q9DCN7 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Rnft1Q9DCN7 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm14628-201ENSMUST00000117508 635 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm15313-201ENSMUST00000119179 282 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm13396-201ENSMUST00000120617 271 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm15986-201ENSMUST00000122153 400 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm26149-201ENSMUST00000157432 108 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm23557-201ENSMUST00000157820 138 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm24750-201ENSMUST00000157843 104 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm24739-201ENSMUST00000158855 292 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Mir3104-201ENSMUST00000174911 63 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm6625-201ENSMUST00000177870 272 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm27928-201ENSMUST00000183747 256 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Mir6346-201ENSMUST00000183982 81 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm27608-201ENSMUST00000184822 162 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm38270-201ENSMUST00000192721 407 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm44446-201ENSMUST00000204864 255 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm10092-201ENSMUST00000077110 180 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm23443-201ENSMUST00000082916 128 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Snord47-201ENSMUST00000083034 77 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm26497-201ENSMUST00000083146 107 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm22973-201ENSMUST00000083298 191 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.71□□□□□ -1.82
Rnft1Q9DCN7 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm23422-201ENSMUST00000102000 107 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm11718-201ENSMUST00000119942 537 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm12956-201ENSMUST00000122184 414 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm22107-201ENSMUST00000122548 100 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm24876-201ENSMUST00000158780 92 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm24085-201ENSMUST00000175172 116 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm20660-201ENSMUST00000177515 289 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm27477-201ENSMUST00000184649 143 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm34091-201ENSMUST00000200875 604 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm44977-201ENSMUST00000205283 420 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm24626-201ENSMUST00000082621 161 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm22571-201ENSMUST00000082984 70 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm8074-201ENSMUST00000095071 252 ntBASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.7□□□□□ -1.82
Rnft1Q9DCN7 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Snord66-201ENSMUST00000104051 75 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Gm12982-201ENSMUST00000117408 190 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Gm14880-201ENSMUST00000117581 292 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Gm12884-201ENSMUST00000120371 325 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Gm13967-201ENSMUST00000120404 380 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 AA413626-201ENSMUST00000121125 494 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.69□□□□□ -1.82
Rnft1Q9DCN7 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms