Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29314-201ENSMUST00000186800 615 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm5058-201ENSMUST00000187331 463 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm29307-201ENSMUST00000187367 696 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm29370-202ENSMUST00000187476 499 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm28253-202ENSMUST00000187971 615 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm29268-201ENSMUST00000188669 615 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm29339-201ENSMUST00000189613 696 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm29169-201ENSMUST00000189835 615 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm28978-201ENSMUST00000191120 615 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm29407-201ENSMUST00000191468 696 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm9696-202ENSMUST00000191541 830 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm37172-201ENSMUST00000191926 615 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Gm18964-201ENSMUST00000193013 563 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col18a1P39061 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.58□□□□□ -1.68
Col18a1P39061 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col18a1P39061 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col18a1P39061 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col18a1P39061 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col18a1P39061 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Col18a1P39061 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col18a1P39061 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col18a1P39061 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.57□□□□□ -1.68
Col18a1P39061 Gm25392-201ENSMUST00000157335 297 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm24958-201ENSMUST00000158009 97 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm22212-201ENSMUST00000158096 106 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.57□□□□□ -1.68
Col18a1P39061 Gm16569-201ENSMUST00000160526 314 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm16326-201ENSMUST00000162843 414 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm26400-201ENSMUST00000175012 85 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm25707-201ENSMUST00000175120 96 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm27028-201ENSMUST00000182303 399 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.57□□□□□ -1.68
Col18a1P39061 Gm44526-201ENSMUST00000204664 121 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm26228-201ENSMUST00000082512 107 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm25080-201ENSMUST00000082526 107 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm24616-201ENSMUST00000083274 139 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Gm25518-201ENSMUST00000083864 107 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col18a1P39061 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col18a1P39061 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col18a1P39061 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.57□□□□□ -1.68
Col18a1P39061 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Col18a1P39061 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col18a1P39061 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col18a1P39061 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC4.56□□□□□ -1.68
Col18a1P39061 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm14119-201ENSMUST00000119511 235 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm22214-201ENSMUST00000157563 172 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm22664-201ENSMUST00000158719 105 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm24465-201ENSMUST00000178398 107 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm14527-201ENSMUST00000179300 639 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Mir6363-201ENSMUST00000184880 114 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 CT485607.2-201ENSMUST00000214650 91 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC4.56□□□□□ -1.68
Col18a1P39061 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col18a1P39061 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col18a1P39061 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col18a1P39061 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col18a1P39061 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col18a1P39061 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col18a1P39061 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.56□□□□□ -1.68
Col18a1P39061 Gm25390-201ENSMUST00000157341 103 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm28094-201ENSMUST00000185262 390 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm29227-201ENSMUST00000187139 315 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm29034-201ENSMUST00000188099 315 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm37757-201ENSMUST00000193072 210 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm37129-201ENSMUST00000195791 315 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm45704-201ENSMUST00000212582 403 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm8074-201ENSMUST00000095071 252 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Col18a1P39061 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col18a1P39061 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Col18a1P39061 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm23322-201ENSMUST00000104464 167 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm13664-201ENSMUST00000117304 345 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm8430-201ENSMUST00000119780 471 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm23262-201ENSMUST00000158323 168 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm17522-201ENSMUST00000178144 498 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms