Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm11357-201ENSMUST00000119758 954 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm12639-201ENSMUST00000121400 493 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm25102-201ENSMUST00000122479 112 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm24517-201ENSMUST00000122560 107 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm28755-201ENSMUST00000185773 199 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm9696-202ENSMUST00000191541 830 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm43114-201ENSMUST00000198298 343 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm45049-201ENSMUST00000207586 591 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm45387-201ENSMUST00000209792 632 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.53□□□□□ -2
Lrif1Q8CDD9 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lrif1Q8CDD9 Gm25411-201ENSMUST00000083760 151 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Mir463-201ENSMUST00000093570 75 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.53□□□□□ -2
Lrif1Q8CDD9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Lrif1Q8CDD9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.53□□□□□ -2.01
Lrif1Q8CDD9 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Lrif1Q8CDD9 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26504-201ENSMUST00000102033 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm25526-201ENSMUST00000104332 132 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm15659-201ENSMUST00000118881 341 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm14428-201ENSMUST00000120408 822 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm12876-201ENSMUST00000120975 408 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm25270-201ENSMUST00000122606 138 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm18417-201ENSMUST00000176564 648 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26502-201ENSMUST00000177732 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm25350-201ENSMUST00000177849 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm23446-201ENSMUST00000177977 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26201-201ENSMUST00000178047 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm24711-201ENSMUST00000178062 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm24609-201ENSMUST00000178166 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm23265-201ENSMUST00000178321 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm22812-201ENSMUST00000178329 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26246-201ENSMUST00000178388 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm25155-201ENSMUST00000178450 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm24760-201ENSMUST00000178530 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm22285-201ENSMUST00000178576 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm22417-201ENSMUST00000178656 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26270-201ENSMUST00000178690 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm23269-201ENSMUST00000178701 107 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm23313-201ENSMUST00000178931 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm23089-201ENSMUST00000178947 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm24153-201ENSMUST00000179280 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm25597-201ENSMUST00000179388 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm25816-201ENSMUST00000179764 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26188-201ENSMUST00000179963 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm26433-201ENSMUST00000180227 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm22128-201ENSMUST00000180346 94 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm29640-201ENSMUST00000187972 278 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm19202-201ENSMUST00000198096 808 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm8041-201ENSMUST00000199755 616 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm43232-201ENSMUST00000201346 364 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm34701-202ENSMUST00000204685 360 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm2436-201ENSMUST00000219562 774 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm23645-201ENSMUST00000083228 108 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Gm24490-201ENSMUST00000083803 98 ntBASIC2.52□□□□□ -2.01
Lrif1Q8CDD9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms