Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm22217-201ENSMUST00000157556 313 ntBASIC0.77□□□□□ -2.29
PrkdcP97313 Gm22843-201ENSMUST00000157710 134 ntBASIC0.77□□□□□ -2.29
PrkdcP97313 Gm23813-201ENSMUST00000175153 77 ntBASIC0.77□□□□□ -2.29
PrkdcP97313 Gm37417-201ENSMUST00000195257 454 ntBASIC0.77□□□□□ -2.29
PrkdcP97313 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
PrkdcP97313 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC0.77□□□□□ -2.29
PrkdcP97313 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
PrkdcP97313 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 Gm12417-201ENSMUST00000119153 403 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 Gm24768-201ENSMUST00000158512 94 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 Gm24666-201ENSMUST00000158937 167 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.76□□□□□ -2.29
PrkdcP97313 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC0.76□□□□□ -2.29
PrkdcP97313 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PrkdcP97313 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC0.76□□□□□ -2.29
PrkdcP97313 Gm44446-201ENSMUST00000204864 255 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 AC173345.3-201ENSMUST00000221245 1093 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
PrkdcP97313 Gm22345-201ENSMUST00000122644 107 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 Gm16546-201ENSMUST00000159442 355 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PrkdcP97313 AC125488.1-201ENSMUST00000219586 212 ntBASIC0.76□□□□□ -2.29
PrkdcP97313 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC0.76□□□□□ -2.29
PrkdcP97313 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC0.76□□□□□ -2.29
PrkdcP97313 Gm11572-201ENSMUST00000119164 120 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm23234-201ENSMUST00000157304 134 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm36954-201ENSMUST00000195362 363 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC0.75□□□□□ -2.29
PrkdcP97313 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PrkdcP97313 AC164297.6-201ENSMUST00000224643 1568 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm43216-201ENSMUST00000196295 1333 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm25992-201ENSMUST00000102437 109 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm25658-201ENSMUST00000158472 128 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.75□□□□□ -2.29
PrkdcP97313 Gm15143-201ENSMUST00000178180 714 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm42581-201ENSMUST00000201774 966 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm18855-201ENSMUST00000206689 570 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
PrkdcP97313 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
PrkdcP97313 Gm16411-201ENSMUST00000122164 1100 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Mir5098-201ENSMUST00000175320 82 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Mir6950-201ENSMUST00000184438 73 ntBASIC0.75□□□□□ -2.29
PrkdcP97313 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
PrkdcP97313 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PrkdcP97313 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC0.75□□□□□ -2.29
PrkdcP97313 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PrkdcP97313 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
PrkdcP97313 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PrkdcP97313 Gm2066-201ENSMUST00000118046 389 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm2288-201ENSMUST00000118560 638 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm2318-201ENSMUST00000119623 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7438-201ENSMUST00000177664 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7408-201ENSMUST00000178014 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7386-201ENSMUST00000178020 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm3657-201ENSMUST00000178170 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7415-201ENSMUST00000178205 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7398-201ENSMUST00000178589 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7391-201ENSMUST00000178680 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm2092-201ENSMUST00000178887 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm7375-201ENSMUST00000179232 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm2759-201ENSMUST00000179938 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm3681-201ENSMUST00000179940 639 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm27733-201ENSMUST00000184803 68 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm18598-201ENSMUST00000207724 597 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm38044-201ENSMUST00000192964 487 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm42454-201ENSMUST00000196805 1181 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Snord14a-201ENSMUST00000082807 87 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm25541-201ENSMUST00000116888 126 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm23466-201ENSMUST00000157133 106 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm23994-201ENSMUST00000158059 88 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm37431-201ENSMUST00000195102 111 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
PrkdcP97313 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Defa-ps6-201ENSMUST00000122172 282 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm23033-201ENSMUST00000157996 134 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC0.74□□□□□ -2.29
PrkdcP97313 Gm45616-201ENSMUST00000211711 319 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC0.74□□□□□ -2.29
PrkdcP97313 AC101945.1-201ENSMUST00000226734 466 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Mir101a-201ENSMUST00000083517 83 ntBASIC0.74□□□□□ -2.29
PrkdcP97313 Gm31230-201ENSMUST00000199725 785 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 198.6 ms