Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.65□□□□□ -1.67
Col18a1P39061 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.65□□□□□ -1.67
Col18a1P39061 Mir471-201ENSMUST00000093596 67 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col18a1P39061 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col18a1P39061 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col18a1P39061 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col18a1P39061 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col18a1P39061 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.64□□□□□ -1.67
Col18a1P39061 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col18a1P39061 Gm23753-201ENSMUST00000157575 149 ntBASIC4.64□□□□□ -1.67
Col18a1P39061 Gm9022-202ENSMUST00000183285 483 ntBASIC4.64□□□□□ -1.67
Col18a1P39061 Gm27893-201ENSMUST00000184408 194 ntBASIC4.64□□□□□ -1.67
Col18a1P39061 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.64□□□□□ -1.67
Col18a1P39061 Gm29754-201ENSMUST00000206269 358 ntBASIC4.64□□□□□ -1.67
Col18a1P39061 Gm45730-201ENSMUST00000212560 395 ntBASIC4.64□□□□□ -1.67
Col18a1P39061 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col18a1P39061 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col18a1P39061 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col18a1P39061 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Col18a1P39061 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col18a1P39061 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Col18a1P39061 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col18a1P39061 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col18a1P39061 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col18a1P39061 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col18a1P39061 Gm22472-201ENSMUST00000104115 134 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Mir881-201ENSMUST00000104844 78 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm11219-201ENSMUST00000118565 358 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col18a1P39061 Gm22722-201ENSMUST00000157467 132 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm23538-201ENSMUST00000157535 101 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm23964-201ENSMUST00000157966 107 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm25223-201ENSMUST00000158200 110 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm22833-201ENSMUST00000158292 132 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm43804-201ENSMUST00000198280 456 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.63□□□□□ -1.67
Col18a1P39061 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.63□□□□□ -1.67
Col18a1P39061 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm22740-201ENSMUST00000083439 109 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm16261-201ENSMUST00000096813 205 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col18a1P39061 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col18a1P39061 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Col18a1P39061 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col18a1P39061 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Col18a1P39061 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col18a1P39061 Gm6829-201ENSMUST00000119858 360 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.63□□□□□ -1.67
Col18a1P39061 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.63□□□□□ -1.67
Col18a1P39061 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.63□□□□□ -1.67
Col18a1P39061 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Gm24610-201ENSMUST00000083270 109 ntBASIC4.63□□□□□ -1.67
Col18a1P39061 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col18a1P39061 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col18a1P39061 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col18a1P39061 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col18a1P39061 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col18a1P39061 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col18a1P39061 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col18a1P39061 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col18a1P39061 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Col18a1P39061 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Col18a1P39061 Gm12255-201ENSMUST00000117184 284 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.62□□□□□ -1.67
Col18a1P39061 Gm37568-201ENSMUST00000191755 364 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 Gm45105-201ENSMUST00000207824 397 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 AC133517.1-203ENSMUST00000225570 390 ntBASIC4.62□□□□□ -1.67
Col18a1P39061 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col18a1P39061 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col18a1P39061 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col18a1P39061 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col18a1P39061 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col18a1P39061 Gm24867-201ENSMUST00000104161 107 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm14129-201ENSMUST00000122436 291 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.61□□□□□ -1.67
Col18a1P39061 Gm22943-201ENSMUST00000158564 76 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm3027-201ENSMUST00000167579 451 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm3104-201ENSMUST00000171004 473 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm37801-201ENSMUST00000194754 274 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm37029-201ENSMUST00000195773 239 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm32222-201ENSMUST00000203296 298 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.61□□□□□ -1.67
Col18a1P39061 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.61□□□□□ -1.67
Col18a1P39061 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 152 ms