Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mir3964-201ENSMUST00000174898 74 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm18396-201ENSMUST00000177095 361 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Mir6402-201ENSMUST00000183406 80 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm19257-201ENSMUST00000186121 183 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm29641-201ENSMUST00000188955 259 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm28384-201ENSMUST00000189079 463 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm37568-201ENSMUST00000191755 364 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm38044-201ENSMUST00000192964 487 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm37533-201ENSMUST00000193848 545 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm19202-201ENSMUST00000198096 808 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm44990-201ENSMUST00000203922 217 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm44903-201ENSMUST00000206840 130 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm44657-201ENSMUST00000208568 450 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm18414-201ENSMUST00000210858 694 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm46193-201ENSMUST00000219399 364 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm14897-201ENSMUST00000118213 207 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm11784-201ENSMUST00000118568 474 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm14835-201ENSMUST00000119039 315 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm14428-201ENSMUST00000120408 822 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm13341-201ENSMUST00000120780 672 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm11389-201ENSMUST00000121407 430 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm14411-201ENSMUST00000121798 914 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm25283-201ENSMUST00000157272 77 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm24910-201ENSMUST00000157289 272 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm22560-201ENSMUST00000157332 120 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm25391-201ENSMUST00000157342 134 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm22390-201ENSMUST00000157588 325 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm23588-201ENSMUST00000157659 99 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm25373-201ENSMUST00000158156 115 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm17162-201ENSMUST00000168538 473 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm17166-201ENSMUST00000172006 431 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Mir3066-201ENSMUST00000175296 83 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Snord93-201ENSMUST00000175580 71 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm23269-201ENSMUST00000178701 107 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm21758-201ENSMUST00000179336 819 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm25156-201ENSMUST00000179809 79 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm29647-201ENSMUST00000188795 666 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm20832-201ENSMUST00000189076 665 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm28241-201ENSMUST00000190916 235 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm28504-201ENSMUST00000190977 666 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm37000-201ENSMUST00000193058 428 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm31511-201ENSMUST00000193134 657 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm38333-201ENSMUST00000193608 604 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm35843-201ENSMUST00000193716 666 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm30638-201ENSMUST00000195570 656 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm36728-201ENSMUST00000195782 665 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm44391-201ENSMUST00000198490 93 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm4945-201ENSMUST00000075152 453 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Gm25755-201ENSMUST00000083396 107 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
Trim3Q9R1R2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.6□□□□□ -1.99
Trim3Q9R1R2 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm26473-201ENSMUST00000116763 127 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm12598-201ENSMUST00000117333 830 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm14657-201ENSMUST00000117461 302 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm22141-201ENSMUST00000157403 277 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm25637-201ENSMUST00000157529 107 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm23895-201ENSMUST00000158108 160 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm22538-201ENSMUST00000158169 299 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm26406-201ENSMUST00000158503 124 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Mir3965-201ENSMUST00000175570 69 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm24925-201ENSMUST00000178157 107 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm4076-201ENSMUST00000179230 965 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm29192-201ENSMUST00000190942 377 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm20915-201ENSMUST00000191575 663 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm31230-201ENSMUST00000199725 785 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms