Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm12721-201ENSMUST00000120621 268 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm14287-201ENSMUST00000121060 117 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.68□□□□□ -1.66
Col18a1P39061 Gm25051-201ENSMUST00000158602 249 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col18a1P39061 Gm10074-201ENSMUST00000174543 249 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm44256-201ENSMUST00000203304 335 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm7675-201ENSMUST00000208828 686 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm45246-201ENSMUST00000210820 367 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.68□□□□□ -1.66
Col18a1P39061 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm24705-201ENSMUST00000082808 107 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Col18a1P39061 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col18a1P39061 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col18a1P39061 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.67□□□□□ -1.66
Col18a1P39061 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Col18a1P39061 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col18a1P39061 Gm26018-201ENSMUST00000104406 128 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Mir883a-201ENSMUST00000104824 76 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Gm15022-201ENSMUST00000122074 746 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col18a1P39061 Gm17187-201ENSMUST00000164622 410 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Mir5099-201ENSMUST00000175257 74 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Gm27285-201ENSMUST00000183875 127 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Gm2427-201ENSMUST00000189121 881 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.67□□□□□ -1.66
Col18a1P39061 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col18a1P39061 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col18a1P39061 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Col18a1P39061 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col18a1P39061 Gm14387-201ENSMUST00000121827 2055 ntBASIC4.67□□□□□ -1.66
Col18a1P39061 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.67□□□□□ -1.66
Col18a1P39061 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Col18a1P39061 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Col18a1P39061 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col18a1P39061 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Gm13504-201ENSMUST00000117490 316 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm11881-201ENSMUST00000119408 572 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.66□□□□□ -1.66
Col18a1P39061 Gm22384-201ENSMUST00000158187 104 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm24819-201ENSMUST00000175094 166 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col18a1P39061 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm24350-202ENSMUST00000198309 132 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.66□□□□□ -1.66
Col18a1P39061 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Col18a1P39061 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Col18a1P39061 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col18a1P39061 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col18a1P39061 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.66□□□□□ -1.66
Col18a1P39061 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col18a1P39061 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col18a1P39061 Gm16032-201ENSMUST00000118534 168 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm12806-201ENSMUST00000119384 268 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm14714-201ENSMUST00000119743 439 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.65□□□□□ -1.66
Col18a1P39061 Gm23169-201ENSMUST00000157157 112 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm7953-201ENSMUST00000168278 469 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm23523-201ENSMUST00000180190 107 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm28030-201ENSMUST00000184987 138 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.65□□□□□ -1.66
Col18a1P39061 Gm20144-201ENSMUST00000203031 165 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Gm19326-201ENSMUST00000219818 326 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.66
Col18a1P39061 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC4.65□□□□□ -1.66
Col18a1P39061 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col18a1P39061 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.65□□□□□ -1.66
Col18a1P39061 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col18a1P39061 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col18a1P39061 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Gm15382-201ENSMUST00000118011 537 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm7429-201ENSMUST00000118664 348 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm13725-201ENSMUST00000122139 207 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm16356-201ENSMUST00000143300 169 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm22037-201ENSMUST00000157280 296 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm24898-201ENSMUST00000158133 106 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col18a1P39061 Gm22716-201ENSMUST00000177596 107 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm6947-201ENSMUST00000186254 78 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm28921-201ENSMUST00000190219 378 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm44399-201ENSMUST00000205043 226 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col18a1P39061 Gm45859-201ENSMUST00000212794 214 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 Gm35262-201ENSMUST00000215133 267 ntBASIC4.65□□□□□ -1.67
Col18a1P39061 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 155.1 ms