Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm24031-201ENSMUST00000083930 131 ntBASIC4.59□□□□□ -1.67
Ubp1Q811S7 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ubp1Q811S7 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.59□□□□□ -1.68
Ubp1Q811S7 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Ubp1Q811S7 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm23746-201ENSMUST00000104229 125 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm23799-201ENSMUST00000175559 120 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Mir7022-201ENSMUST00000183749 61 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm37089-201ENSMUST00000195616 129 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm2059-201ENSMUST00000212025 287 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm9818-201ENSMUST00000050900 255 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Mir99a-201ENSMUST00000083596 65 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.58□□□□□ -1.68
Ubp1Q811S7 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm11065-201ENSMUST00000111462 228 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm12760-201ENSMUST00000117861 482 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm14971-201ENSMUST00000117980 663 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm14629-201ENSMUST00000122428 144 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm22957-201ENSMUST00000122511 123 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm22842-201ENSMUST00000157709 118 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm26034-201ENSMUST00000158154 116 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm20660-201ENSMUST00000177515 289 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm23925-202ENSMUST00000188429 132 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm2522-201ENSMUST00000204280 322 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm45420-201ENSMUST00000211243 425 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm18921-201ENSMUST00000221798 366 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm25078-201ENSMUST00000082530 107 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm22826-201ENSMUST00000083774 165 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.57□□□□□ -1.68
Ubp1Q811S7 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ubp1Q811S7 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubp1Q811S7 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubp1Q811S7 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm24544-201ENSMUST00000103862 110 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm22779-201ENSMUST00000104085 107 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Mir881-201ENSMUST00000104844 78 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm12793-201ENSMUST00000119268 292 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm23171-201ENSMUST00000157159 264 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm22637-201ENSMUST00000158144 283 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm26028-201ENSMUST00000158660 294 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm29484-201ENSMUST00000186067 324 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm28650-201ENSMUST00000188413 411 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm8069-201ENSMUST00000197887 154 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm45007-201ENSMUST00000206237 366 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm45236-201ENSMUST00000208632 229 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm19096-201ENSMUST00000209705 766 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm25202-201ENSMUST00000082838 191 ntBASIC4.56□□□□□ -1.68
Ubp1Q811S7 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubp1Q811S7 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 239.1 ms